DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment snf and rnpc3

DIOPT Version :9

Sequence 1:	NP_511045.1	Gene:	snf / 31442	FlyBaseID:	FBgn0003449	Length:	216	Species:	Drosophila melanogaster
Sequence 2:	NP_001035019.1	Gene:	rnpc3 / 565672	ZFINID:	ZDB-GENE-060312-35	Length:	505	Species:	Danio rerio

Alignment Length:	123	Identity:	30/123 - (24%)
Similarity:	56/123 - (45%)	Gaps:	26/123 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 PNQTIYINNLNEKIKKEELKKSLYAIFSQFG-----QILDIVALKTLKMRGQAFVIFKEIGSASN 64
            |...:|:.|:.:.:::::| |.:|..:....     .:.|||.:|..:|:||||:......||..
Zfish   403 PTCRLYVKNVAKHVEEKDL-KFIYGRYIDISSEEERNMFDIVLMKEGRMKGQAFIGLPSERSAQK 466

  Fly    65 ALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKK 122
            ||:...|:...|||:.:.:::|             .:||:       ...|.||..:|
Zfish   467 ALKETNGYVLKDKPLVVQFARS-------------AKPKQ-------ESADPKKGGRK 504

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
snf	NP_511045.1	RRM	<5..177	CDD:223796	30/123 (24%)
		RRM_SF	6..96	CDD:302621	23/94 (24%)
		RRM2_SNF	137..216	CDD:240923
rnpc3	NP_001035019.1	RRM	<1..>141	CDD:223796
		RRM1_RBM40_like	16..88	CDD:240684
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	96..123
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	193..236
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	354..374
		RRM	<371..>495	CDD:223796	26/112 (23%)
		RRM2_RBM40_like	404..486	CDD:240685	22/82 (27%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	486..505		7/39 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910