Protein Alignment snf and snrpb2

DIOPT Version :10

• Sequence 1: NP_511045.1
• Gene: snf / 31442
• FlyBaseID: FBgn0003449
• Length: 216
• Species: Drosophila melanogaster
• Sequence 2: NP_001011120.1
• Gene: snrpb2 / 496533
• XenbaseID: XB-GENE-1010457
• Length: 223
• Species: Xenopus tropicalis
• Alignment Length: 223
• Identity: 146/223 - (65%)
• Similarity: 176/223 - (78%)
• Gaps: 7/223 - (3%)

  Fly     1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNA 65
            |::.||.|:|||||.:|:||.|||:||||:|||||.::|||||||:||||||||||||:.||:||
 Frog     1 MDIRPNHTVYINNLCDKVKKPELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELSSATNA 65

  Fly    66 LRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKKKPSSAENS 130
            ||.:||||||:|||:|.|:|||||::.|:||||.::.||.:..|............|||:.|.|:
 Frog    66 LRQLQGFPFYNKPMRIQYAKSDSDVILKMKGTFADKEKKKEKKKAKAQEQAANAANKKPALASNA 130

  Fly   131 N--PNAQTEQ-----PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTE 188
            |  |.|...|     |||.||||.||||||||||||||||||||||||||||.|||||||||..|
 Frog   131 NNAPGASQNQQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENE 195

  Fly   189 LQSNAAKEALQGFKITPTHAMKITFAKK 216
            .::.||::|||||||||:||||||:|.|
 Frog   196 TEAGAARDALQGFKITPSHAMKITYANK 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snf	NP_511045.1	RRM1_SNF	1..85	CDD:409905	60/83 (72%)
		RRM2_SNF	137..216	CDD:240923	64/83 (77%)
snrpb2	NP_001011120.1	RRM1_U2B	6..96	CDD:409907	64/89 (72%)
		RRM2_U2B	144..223	CDD:240925	63/78 (81%)