Protein Alignment snf and msl1

DIOPT Version :9

• Sequence 1: NP_511045.1
• Gene: snf / 31442
• FlyBaseID: FBgn0003449
• Length: 216
• Species: Drosophila melanogaster
• Sequence 2: NP_595571.1
• Gene: msl1 / 2541219
• PomBaseID: SPBC8D2.09c
• Length: 111
• Species: Schizosaccharomyces pombe
• Alignment Length: 90
• Identity: 44/90 - (48%)
• Similarity: 67/90 - (74%)
• Gaps: 1/90 - (1%)

  Fly     6 NQ-TIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTM 69
            || |:|:||||:||.|.:|:.:||.:||.:|.::|||||||.||||||.|:|.:..:|:.|::.:
pombe     2 NQNTLYVNNLNDKINKNDLRTALYMLFSTYGTVVDIVALKTPKMRGQAHVVFFDPSAAAIAMKAL 66

  Fly    70 QGFPFYDKPMQIAYSKSDSDIVAKI 94
            :.|.|:.|.|:|.|:.|.|.|:.:|
pombe    67 KNFIFFGKEMKIQYAHSKSKIIERI 91

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snf	NP_511045.1	RRM	<5..177	CDD:223796	44/90 (49%)
		RRM_SF	6..96	CDD:302621	44/90 (49%)
		RRM2_SNF	137..216	CDD:240923
msl1	NP_595571.1	RRM	<1..>86	CDD:223796	41/83 (49%)
		RRM1_U1A_like	5..82	CDD:240692	38/76 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	79	1.000	Domainoid score	I2358
eggNOG	1	0.900	-	-		E1_KOG4206
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001375
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100753
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1270
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.740