DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and AT1G54610

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_175862.1 Gene:AT1G54610 / 841903 AraportID:AT1G54610 Length:572 Species:Arabidopsis thaliana


Alignment Length:367 Identity:125/367 - (34%)
Similarity:199/367 - (54%) Gaps:54/367 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KTERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHE 72
            |.:.:.|:..:|:|.::.||||:|.:|.:|||:||::..:.|.  :.:...| |||.:|:.|.|.
plant   114 KADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP--ESVKFMA-REILVLRRLDHP 175

  Fly    73 NII---GLVDVFGQLS-NVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWI 133
            |::   |||.  .::| ::.|||.:||.||..:.....:..:::.:|......:.|||:.|...:
plant   176 NVVKLEGLVT--SRMSCSLYLVFQYMDHDLAGLASSPVVKFSESEVKCLMRQLISGLEHCHSRGV 238

  Fly   134 LHRDLKPNNLLVNSDGILKIGDFGLAKSFGSPN--RIYTHHVVTRWYRSPELLFGARQYGTGVDM 196
            ||||:|.:|||::..|:|||.|||||..| .||  |..|..|||.|||:||||.||..||.|:|:
plant   239 LHRDIKGSNLLIDDGGVLKIADFGLATIF-DPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDL 302

  Fly   197 WAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEW---------------PHLSKLHDY 246
            |:.|||||||:...|.|||.::::||.:|:...|:|:|..|               |:...:.: 
plant   303 WSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEDYWKKGKFTHGAIYKPREPYKRSIRE- 366

  Fly   247 LQFRNFPGTPLDNIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKP---APTVGPKLP 308
             .|::||.:.|.            |:..|.::.|..|.:...||...:|.::|   .|...||.|
plant   367 -TFKDFPPSSLP------------LIDALLSIEPEDRQTASAALKSEFFTSEPYACEPADLPKYP 418

  Fly   309 MPSAILAAKEGANPQTGDTKPALKRKLVETTVRGNGLAQKKR 350
             ||..:.||. .:.:|       :|:...:..:|:| |:|.|
plant   419 -PSKEIDAKR-RDEET-------RRQRAASKAQGDG-ARKNR 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 112/320 (35%)
AT1G54610NP_175862.1 STKc_CDK9_like 118..402 CDD:270832 107/303 (35%)

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