DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and AT1G03740

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_171870.4 Gene:AT1G03740 / 839423 AraportID:AT1G03740 Length:740 Species:Arabidopsis thaliana


Alignment Length:382 Identity:132/382 - (34%)
Similarity:197/382 - (51%) Gaps:56/382 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KTERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGIN-RTALREIKILQELQH 71
            :...:.||..:|:|.:::||:|||.:.|:|||:||:    |.|..|..: :...|||.:::.|.|
plant   209 RANTFEKLEKIGQGTYSSVYRARDLLHNKIVALKKV----RFDLNDMESVKFMAREIIVMRRLDH 269

  Fly    72 ENII---GLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWI 133
            .|::   ||:.. ...|::.|||::||.||..:.....:..|:..:|.|....|.|||:.|...:
plant   270 PNVLKLEGLITA-PVSSSLYLVFEYMDHDLLGLSSLPGVKFTEPQVKCYMRQLLSGLEHCHSRGV 333

  Fly   134 LHRDLKPNNLLVNSDGILKIGDFGLAKSFGSPNRI-YTHHVVTRWYRSPELLFGARQYGTGVDMW 197
            ||||:|.:|||::|.|:|||.|||||..|.....: .|.||||.|||.||||.||..||.|||:|
plant   334 LHRDIKGSNLLIDSKGVLKIADFGLATFFDPAKSVSLTSHVVTLWYRPPELLLGASHYGVGVDLW 398

  Fly   198 AVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEW---------------PHLSKLHDYL 247
            :.||||.||....|.:||.::::||.:||...|:|||..|               |:..|:.:  
plant   399 STGCILGELYAGKPILPGKTEVEQLHKIFKLCGSPTENYWRKQKLPSSAGFKTAIPYRRKVSE-- 461

  Fly   248 QFRNFPGTPLDNIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKP---APTVGPKLPM 309
            .|::||.:            ::.|::.|.:::|..|.|...||...||..||   .|:..||.| 
plant   462 MFKDFPAS------------VLSLLETLLSIDPDHRSSADRALESEYFKTKPFACDPSNLPKYP- 513

  Fly   310 PSAILAAK-------------EGANPQTGDTKPALKRKLVETTVRGNGLAQKKRLQF 353
            ||..:.||             |....|...|:.:.:||.|......|.|:.....|:
plant   514 PSKEIDAKMRDEAKRQQPMRAEKQERQDSMTRISHERKFVPPVKANNSLSMTMEKQY 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 118/319 (37%)
AT1G03740NP_171870.4 STKc_CDK9_like 213..497 CDD:270832 111/302 (37%)

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