DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and CDKC2

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_201301.1 Gene:CDKC2 / 836620 AraportID:AT5G64960 Length:513 Species:Arabidopsis thaliana


Alignment Length:360 Identity:126/360 - (35%)
Similarity:197/360 - (54%) Gaps:41/360 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENIIG 76
            :.||..:|||.:..||.|::..|.:|||:|||:   .::.|:|...||:||||||::|.|||:|.
plant    26 FEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIR---MDNEREGFPITAIREIKILKKLHHENVIH 87

  Fly    77 LVDVF----------GQLSN------VSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGL 125
            |.::.          |:..|      :.:||::||.||..:.....:..|...||.|....|.||
plant    88 LKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGL 152

  Fly   126 EYLHLNWILHRDLKPNNLLVNSDGILKIGDFGLAKSFGSPNR-IYTHHVVTRWYRSPELLFGARQ 189
            .|.|:|.:||||:|.:|||::::|.||:.|||||:|:...:. ..|:.|:|.|||.||||.||.:
plant   153 HYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATK 217

  Fly   190 YGTGVDMWAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPG 254
            ||..:|||:||||.|||:...|.:||.::.:||.:|:...|:|.|:.||.:||:..|.|.::  .
plant   218 YGPAIDMWSVGCIFAELLNGKPILPGKTENEQLNKIYELCGSPDESNWPGVSKMPWYNQMKS--S 280

  Fly   255 TPLD----NIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSAILA 315
            .||.    .|:.......:.|::::..::|.:|:..::||...||...|.|.....||       
plant   281 RPLKRRVREIYRHFDRHALELLEKMLVLDPSQRICAKDALDAEYFWTDPLPCDPKSLP------- 338

  Fly   316 AKEGANPQTGDTKPALKRKLVETTVRGNGLAQKKR 350
                    |.::....:.|.....:|.|..|.||:
plant   339 --------TYESSHEFQTKKKRQQMRHNEEAAKKQ 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 117/316 (37%)
CDKC2NP_201301.1 STKc_CDK9_like 26..325 CDD:270832 113/303 (37%)

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