DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and Cdk12

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001029039.1 Gene:Cdk12 / 192350 RGDID:621111 Length:1484 Species:Rattus norvegicus


Alignment Length:366 Identity:110/366 - (30%)
Similarity:187/366 - (51%) Gaps:55/366 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENI 74
            :::..:..:|||.:..||||:|..|.::||:||::   .::.::|...||:||||||::|.|:::
  Rat   721 DKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVR---LDNEKEGFPITAIREIKILRQLVHQSV 782

  Fly    75 IGLVDVFGQLSNV----------SLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLH 129
            :.:.::.....:.          .|||::||.||..:::...:..::.:||::....::||:|.|
  Rat   783 VNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCH 847

  Fly   130 LNWILHRDLKPNNLLVNSDGILKIGDFGLAKSFGS-PNRIYTHHVVTRWYRSPELLFGARQYGTG 193
            ....||||:|.:|:|:|:.|.:|:.|||||:.:.| .:|.||:.|:|.|||.||||.|..:|...
  Rat   848 KKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPA 912

  Fly   194 VDMWAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYL----------- 247
            :|:|:.||||.||..:.|....:.:|.||..|....|:|..|.||.:.|| .|.           
  Rat   913 IDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKL-PYFNTMKPKKQYRR 976

  Fly   248 ----QFRNFPGTPLDNIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYF----ANKPAPTVG 304
                :|...|...||            |:..:..::|.:|.:..:.|...:.    .:|.||   
  Rat   977 RLREEFSFIPSAALD------------LLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAP--- 1026

  Fly   305 PKLPM---PSAILAAKEGANPQTG---DTKPALKRKLVETT 339
            |.||.   ...:.:.|.....|:|   :.:|..|....|||
  Rat  1027 PDLPHWQDCHELWSKKRRRQRQSGIVIEEQPPSKASRKETT 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 100/326 (31%)
Cdk12NP_001029039.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..462
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 485..603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 616..699
STKc_CDK12 715..1016 CDD:270847 96/310 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1046..1101 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1199
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1218..1356
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1437..1484
Blue background indicates that the domain is not in the aligned region.

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