DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and cdk12

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_012826946.1 Gene:cdk12 / 100038049 XenbaseID:XB-GENE-493308 Length:1466 Species:Xenopus tropicalis


Alignment Length:363 Identity:109/363 - (30%)
Similarity:190/363 - (52%) Gaps:31/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENI 74
            :::..:..:|||.:..||||:|..|.::||:||::   .::.::|...||:||||||::|.|:::
 Frog   708 DKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVR---LDNEKEGFPITAIREIKILRQLIHKSV 769

  Fly    75 IGLVDVFGQLSNV----------SLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLH 129
            :.:.::.....:.          .|||::||.||..:::...:..::.:||::....::||||.|
 Frog   770 VNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVQFSEDHIKSFMKQLMEGLEYCH 834

  Fly   130 LNWILHRDLKPNNLLVNSDGILKIGDFGLAKSFGS-PNRIYTHHVVTRWYRSPELLFGARQYGTG 193
            ....||||:|.:|:|:|:.|.:|:.|||||:.:.| .:|.||:.|:|.|||.||||.|..:|...
 Frog   835 KKNFLHRDIKCSNILLNNSGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPA 899

  Fly   194 VDMWAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDY------LQFRNF 252
            :|:|:.||||.||..:.|....:.:|.||..|....|:|..|.||.:.||..:      .|:|. 
 Frog   900 IDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRR- 963

  Fly   253 PGTPLDNIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVG-PKLPM---PSAI 313
               .|...|:......:.|:..:..::|.:|.:..:.|...:..:.....:. |.||.   ...:
 Frog   964 ---RLREEFSFVPTPALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVDVCKMATPDLPHWQDCHEL 1025

  Fly   314 LAAKEGANPQTG---DTKPALKRKLVETTVRGNGLAQK 348
            .:.|.....|:|   :..||:|....|:.....|.|.|
 Frog  1026 WSKKRRRQRQSGIVLEEPPAIKAPRKESVSVPGGDAMK 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 97/314 (31%)
cdk12XP_012826946.1 STKc_CDK12 702..1003 CDD:270847 96/301 (32%)

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