DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn13R and Adrm1

DIOPT Version :10

Sequence 1:NP_572205.1 Gene:Rpn13R / 31433 FlyBaseID:FBgn0029745 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_062796.2 Gene:Adrm1 / 56436 MGIID:1929289 Length:407 Species:Mus musculus


Alignment Length:389 Identity:116/389 - (29%)
Similarity:175/389 - (44%) Gaps:87/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SNAHNLVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVELDIVATPGVLE 68
            |:...|||::||:|.|.|..|.||.||||:::::: ||:.:|..|.||.||:||.|::..|...|
Mouse    18 SSTKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQT-DDSLIHFCWKDRTSGTVEDDLIIFPDDCE 81

  Fly    69 FRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELI----------ASGERQRD 123
            |:|:.||.:|||||||:...::|.||||||.:.|.|...|::|||.:          |||. ...
Mouse    82 FKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNPPMPGSLGASGS-SGH 145

  Fly   124 EIAA--AEGDMDT---DADHTTARR-----------GFGGSENPQILEEMLVETQATWLPANRSL 172
            |::|  .||.:.:   :..|:...:           |.|....|.:...:    .::..||:.|.
Mouse   146 ELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLL----GSSGPPASSSS 206

  Fly   173 NHWQTGDAMEEP----------PLPFA---------DPDANTDTDTDTYTSES------------ 206
            :..::..|...|          |.|.|         .|..::...|.|..|.:            
Mouse   207 SSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPAPSSGNGTSTAASPTQPIQLSDLQSIL 271

  Fly   207 ----------GIQTFDLAAVLRLHGAEAVDKVLSCPSRREKLMAQLPKDHEAMDEQSDILEHLHS 261
                      |.|..|||:||.   .|.:..:|:....:|:|:..||..........:|...|.|
Mouse   272 ATMNVPAGPGGSQQVDLASVLT---PEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTS 333

  Fly   262 AQFYESLSSFSVGLHSGALRKSLEPLL-QSDDNREALNAAQVGDVERFLRELERN------DGD 318
            .||.::|..||..|.||    .|.||: |.....||:.||..||||.|.:.::.|      :||
Mouse   334 PQFQQALGMFSAALASG----QLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKSDPKEGD 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn13RNP_572205.1 PH_Rpn13 10..115 CDD:270124 51/104 (49%)
RPN13_C 209..312 CDD:465170 36/103 (35%)
Adrm1NP_062796.2 PH_Rpn13 24..128 CDD:270124 51/104 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..259 12/62 (19%)
RPN13_C 274..381 CDD:465170 37/113 (33%)
Interaction with UCHL5. /evidence=ECO:0000250 362..407 12/32 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..407 3/13 (23%)

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