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Protein Alignment Rpn13R and C56G2.9
DIOPT Version :10
| Sequence 1: | NP_572205.1 |
Gene: | Rpn13R / 31433 |
FlyBaseID: | FBgn0029745 |
Length: | 324 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_741189.2 |
Gene: | C56G2.9 / 266886 |
WormBaseID: | WBGene00016982 |
Length: | 176 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 87 |
Identity: | 18/87 - (20%) |
| Similarity: | 30/87 - (34%) |
Gaps: | 25/87 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 229 LSCPSRREKLMAQLPKDHEAMDE------------QSDILEHLHSAQFYESLSSFSVGLHSGALR 281
|...:|..||..|...|.:.|.| :|| :..|:.|:.:..|.:.
Worm 26 LDAKTRDLKLSDQAKNDKKYMSEMETKNPKRKSIKKSD-----------QKPSTMSLNVGKGGVE 79
Fly 282 KSLEPLLQSDDNREALNAAQVG 303
|..|.: |.....:|.:..:|
Worm 80 KEKETI--SSQRSNSLESPGLG 99
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rpn13R | NP_572205.1 |
PH_Rpn13 |
10..115 |
CDD:270124 |
|
| RPN13_C |
209..312 |
CDD:465170 |
18/87 (21%) |
| C56G2.9 | NP_741189.2 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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