Protein Alignment Rpn13R and rpn1301

DIOPT Version :10

• Sequence 1: NP_572205.1
• Gene: Rpn13R / 31433
• FlyBaseID: FBgn0029745
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_596747.1
• Gene: rpn1301 / 2540980
• PomBaseID: SPBC342.04
• Length: 291
• Species: Schizosaccharomyces pombe
• Alignment Length: 353
• Identity: 85/353 - (24%)
• Similarity: 138/353 - (39%)
• Gaps: 108/353 - (30%)

  Fly     8 NLVEYKAG--RMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRS-GSVELDIVATPGVLEF 69
            :|:.:|||  |.|...|::..|..||.:.:.|.| ...:|..|..|.. .:.|.||:.......|
pombe     2 SLITFKAGKLRRVPGTKLLRADPEKGYIVMNRDA-YGLIHFQWAKRNDLENPEDDIIVFSSECTF 65

  Fly    70 RRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELIASGERQRDEIAAAEGDMDT 134
            .::.:|.|||.|:|||..|....|:||||...|.|..:.:|:|..|    :.:|.:..|..|:.|
pombe    66 EKVTECTTGRAYMLKYPSSAHSLFYWMQEASDDNDTSYAERINSYI----KDQDLLDPARSDVAT 126

  Fly   135 DADHTTARRGFGGSENPQILEEMLVETQATWLPANRSLNHWQTGDAMEEPPLPFADPDANTDTDT 199
            .:|                    ::|.                 |.:|:.. |.|.|     |::
pombe   127 VSD--------------------MMEV-----------------DTVEQSE-PIAQP-----TES 148

  Fly   200 DTYTSESGIQTFDLAAVLRLHGAEAVDKVLSCPSRR----------------------------- 235
            ...:||.|....|     .::.:|||..:|:..|.:
pombe   149 SKESSEIGAPNSD-----EINSSEAVRNLLATISAQAGFGGSTVDLCEILKPSNLTDLLCQEGVI 208

  Fly   236 EKLMAQLPKDHEAMDEQSDILEHLHSAQFYESLSSFSVGLHS-------GALRKSLEPLLQSDDN 293
            ::||..:|.|  ..:....:|..:.|.|:.::|.|||..|:|       .||..||:
pombe   209 DRLMPYMPPD--TPNNLEGVLAIVSSPQYAQALRSFSQALNSPGGVNIISALGLSLD-------- 263

  Fly   294 REALNAAQVGDVERFL----RELERNDG 317
             |:.|..:.|.:: ||    |.:.||:|
pombe   264 -ESANPNEGGALQ-FLKAIARFVSRNNG 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn13R	NP_572205.1	PH_Rpn13	10..115	CDD:270124	36/107 (34%)
		RPN13_C	209..312	CDD:465170	29/142 (20%)
rpn1301	NP_596747.1	PH_Rpn13	4..111	CDD:270124	36/107 (34%)
		RPN13_C	177..280	CDD:465170	23/114 (20%)