DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and GFI1B

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001358837.1 Gene:GFI1B / 8328 HGNCID:4238 Length:352 Species:Homo sapiens


Alignment Length:139 Identity:46/139 - (33%)
Similarity:69/139 - (49%) Gaps:16/139 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1164 SASSNASSHGSAEALCMGSSGGANEDSSSGN-----NKFVCRVCMKTFSLQRLLNRHMKCHSDIK 1223
            :.|....:|..::.:..|||.....|....:     ..|.||:|.|.|.....|:.|:..|||.:
Human   204 AVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQERSFECRMCGKAFKRSSTLSTHLLIHSDTR 268

  Fly  1224 RYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERR 1288
            .|.|.||||.|:...|:|:||..|||.:|:||.:|.|:|:|..:|.:|.:| |:          .
Human   269 PYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRK-HT----------G 322

  Fly  1289 AKMYVCEEC 1297
            .|.:.||.|
Human   323 FKPFSCELC 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 7/19 (37%)
zf-H2C2_2 1212..1235 CDD:290200 11/22 (50%)
C2H2 Zn finger 1227..1247 CDD:275368 10/19 (53%)
zf-H2C2_2 1239..1264 CDD:290200 13/24 (54%)
C2H2 Zn finger 1255..1276 CDD:275368 8/20 (40%)
GFI1BNP_001358837.1 C2H2 Zn finger 165..186 CDD:275368
C2H2 Zn finger 194..214 CDD:275368 2/9 (22%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
COG5048 252..>329 CDD:227381 31/87 (36%)
C2H2 Zn finger 272..292 CDD:275368 10/19 (53%)
zf-H2C2_2 284..309 CDD:372612 13/24 (54%)
C2H2 Zn finger 300..320 CDD:275368 8/20 (40%)
C2H2 Zn finger 328..345 CDD:275368 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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