DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and znf989

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001018578.1 Gene:znf989 / 553777 ZFINID:ZDB-GENE-050522-337 Length:381 Species:Danio rerio


Alignment Length:224 Identity:55/224 - (24%)
Similarity:99/224 - (44%) Gaps:35/224 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1128 PQQQNMQQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNAS-SHGSAE----ALCMGSSGGAN 1187
            |::|. :..|.::..|....:::.|.::|....::..::...| .|...:    ..|:.....:.
Zfish    24 PEEQT-ELMVLKEEFQDLNEMEESQCERHQDLTTDEKSTPKKSLPHKRVQKNNFTCCVCGKCFSQ 87

  Fly  1188 EDS-------SSGNNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTR 1245
            ..|       .:|:..|.|..|.|:|:.:..::.||:.|:..:.|.|..|.|||.....||.|.|
Zfish    88 RHSLKVHMRIHTGDKLFTCDQCGKSFTQKSKIDVHMRVHTSERHYSCPQCAKGFRQKQHLKLHMR 152

  Fly  1246 THTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYA-------YKER-----------RAKMY 1292
            .|:|.:|:.||.|.|.|.|..:|:||. .:||.:..||       :::|           |.|.:
Zfish   153 IHSGEKPFPCNQCGKRFNQLQALQSHF-TIHSGERPYACTQCEKSFRQRPSLEKHLKVHSREKPF 216

  Fly  1293 VCEECGHTTCEPEVHYLHLK---NNHPFS 1318
            .|.:||:...:.|....|::   ...||:
Zfish   217 TCSQCGNGFTQKERLQNHMRIHTGEKPFA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 6/19 (32%)
zf-H2C2_2 1212..1235 CDD:290200 8/22 (36%)
C2H2 Zn finger 1227..1247 CDD:275368 9/19 (47%)
zf-H2C2_2 1239..1264 CDD:290200 12/24 (50%)
C2H2 Zn finger 1255..1276 CDD:275368 9/20 (45%)
znf989NP_001018578.1 C2H2 Zn finger 78..98 CDD:275368 2/19 (11%)
zf-H2C2_2 90..115 CDD:290200 7/24 (29%)
C2H2 Zn finger 106..126 CDD:275368 6/19 (32%)
C2H2 Zn finger 134..154 CDD:275368 9/19 (47%)
zf-H2C2_2 146..171 CDD:290200 12/24 (50%)
COG5048 <149..377 CDD:227381 28/98 (29%)
C2H2 Zn finger 162..182 CDD:275368 9/20 (45%)
C2H2 Zn finger 190..210 CDD:275368 1/19 (5%)
C2H2 Zn finger 218..238 CDD:275368 5/19 (26%)
zf-H2C2_2 231..255 CDD:290200 3/15 (20%)
C2H2 Zn finger 246..266 CDD:275368 55/224 (25%)
zf-H2C2_2 258..283 CDD:290200
C2H2 Zn finger 274..294 CDD:275368
zf-H2C2_2 290..311 CDD:290200
C2H2 Zn finger 302..322 CDD:275368
zf-H2C2_2 314..339 CDD:290200
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 356..376 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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