DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and ovol2

DIOPT Version :10

Sequence 1:NP_726971.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001004998.1 Gene:ovol2 / 448478 XenbaseID:XB-GENE-854193 Length:287 Species:Xenopus tropicalis


Alignment Length:238 Identity:102/238 - (42%)
Similarity:132/238 - (55%) Gaps:36/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1106 IDCI------DDLSKHG-------HHSQHQQQQGS-------PQQQNMQQSVQQQSVQQQQSLQQ 1150
            ||||      |.||...       ...:.....||       |.....|..:...|.:.....:.
 Frog    36 IDCIFKYVTEDSLSNSSAGDPAGDSPERSSSDSGSCNGSITTPPHNTPQSGLVSPSRKDSTKQED 100

  Fly  1151 QQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNKFVCRVCMKTFSLQRLLNRH 1215
            :::|....|....||.|....          ::|..:|:..|      |.:|.|.|.|||:||||
 Frog   101 EEEQTSDPHGKRPSARSKIKF----------TTGSCSEEIYS------CEICAKGFRLQRMLNRH 149

  Fly  1216 MKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQH 1280
            :|||:.:||:||||||||||||||||||.|||||:|||||.:|.|:||||||||||.:|:|.||.
 Frog   150 LKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCEICNKAFTQRCSLESHLKKIHGVQQ 214

  Fly  1281 QYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHPFSPALLK 1323
            .||||:||.|::|||:||:|....|..|||:.::||.|..|.|
 Frog   215 GYAYKQRRDKLFVCEDCGYTGPSQEDLYLHVYDSHPGSAFLKK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_726971.1 C2H2 Zn finger 1199..1219 CDD:275368 12/19 (63%)
zf-H2C2_2 1212..1235 CDD:463886 17/22 (77%)
C2H2 Zn finger 1227..1247 CDD:275368 18/19 (95%)
zf-H2C2_2 1239..1264 CDD:463886 18/24 (75%)
C2H2 Zn finger 1255..1276 CDD:275368 14/20 (70%)
ovol2NP_001004998.1 C2H2 Zn finger 133..153 CDD:275368 12/19 (63%)
zf-H2C2_2 145..169 CDD:463886 17/23 (74%)
SUF4-like 158..>210 CDD:411020 42/51 (82%)
C2H2 Zn finger 161..182 CDD:411020 19/20 (95%)
C2H2 Zn finger 161..181 CDD:275368 18/19 (95%)
zf-H2C2_2 173..198 CDD:463886 18/24 (75%)
C2H2 Zn finger 189..210 CDD:411020 14/20 (70%)
C2H2 Zn finger 189..210 CDD:275368 14/20 (70%)
zf_C2H2_ZHX 223..>261 CDD:465737 16/35 (46%)
C2H2 Zn finger 228..245 CDD:275368 8/16 (50%)

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