DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ovo and mynn

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_017945235.2 Gene:mynn / 101730887 XenbaseID:XB-GENE-941010 Length:649 Species:Xenopus tropicalis


Alignment Length:202 Identity:61/202 - (30%)
Similarity:83/202 - (41%) Gaps:29/202 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1131 QNMQQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNN 1195
            ||:  |:...:|.|:.:..||.........||.:..:|         :|...|.....|.....|
 Frog   286 QNI--SLDTLAVTQKPAKSQQDCAMKEHCISNIADITN---------MCTMESCEKELDQKYSKN 339

  Fly  1196 KFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEK 1260
            |.||..|.|.||....|.|||:.|..:|.|:|..|.|.|.....||.|.|||||.:||:|..|:|
 Frog   340 KPVCNTCGKVFSEASSLRRHMRIHKGVKPYVCHLCAKAFTQCNQLKTHVRTHTGEKPYQCKKCDK 404

  Fly  1261 SFTQRCSLESHCQKVHSVQHQY------------------AYKERRAKMYVCEECGHTTCEPEVH 1307
            .|.|:|.|..|.:..|..:..|                  |.|....|.|||:.||....:....
 Frog   405 GFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTL 469

  Fly  1308 YLHLKNN 1314
            ..|::.:
 Frog   470 TYHVRRH 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 9/19 (47%)
zf-H2C2_2 1212..1235 CDD:290200 10/22 (45%)
C2H2 Zn finger 1227..1247 CDD:275368 8/19 (42%)
zf-H2C2_2 1239..1264 CDD:290200 14/24 (58%)
C2H2 Zn finger 1255..1276 CDD:275368 8/20 (40%)
mynnXP_017945235.2 BTB_POZ_ZBTB31_myoneurin 47..157 CDD:349526
zf-C2H2 342..363 CDD:395048 10/20 (50%)
C2H2 Zn finger 343..363 CDD:275368 9/19 (47%)
zf-H2C2_2 355..380 CDD:404364 11/24 (46%)
C2H2 Zn finger 371..391 CDD:275368 8/19 (42%)
zf-H2C2_2 384..408 CDD:404364 14/23 (61%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
SFP1 <422..477 CDD:227516 10/55 (18%)
C2H2 Zn finger 428..448 CDD:275368 1/19 (5%)
C2H2 Zn finger 456..476 CDD:275368 4/19 (21%)
zf-H2C2_2 469..492 CDD:404364 1/8 (13%)
C2H2 Zn finger 484..504 CDD:275368
C2H2 Zn finger 512..532 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.