DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ca16b

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_021332937.1 Gene:ca16b / 569183 ZFINID:ZDB-GENE-080818-1 Length:1382 Species:Danio rerio


Alignment Length:1396 Identity:325/1396 - (23%)
Similarity:506/1396 - (36%) Gaps:415/1396 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 RAANGDSVYFDYPDILEPGRTYEVVVKTIADNVNSWPASGEVTLRPRPV-------------RSL 440
            |.|:|:. |:.|.....|.|.           .:::|..||....|..:             .:|
Zfish    47 RRASGEP-YWAYSGTYGPRRW-----------ASAYPECGERNQSPVDILDPETQVSQECQELTL 99

  Fly   441 GGFLDDRSNALHISWEPAET-----------------GRQDSYRISYH-EQTNASEVP------A 481
            .||....||...:. ...:|                 ||..:.::.:| ..||.|...      .
Zfish   100 DGFETKSSNRTTMK-NTGKTVSIVLKNDYFVRGAGLPGRFKAEKVEFHWGSTNGSAGSEHSINGK 163

  Fly   482 PFPVAAESQI-TTNLTEYTLDSLLAGRRYLIAVQALSKGVASNASDITRYTRPAAPLIQELRSID 545
            .|||  |.|| ..|..::...|.....|.:||..|:...||      |:....|.|:|..|:.: 
Zfish   164 KFPV--EMQIYFYNSDDFDSLSTAIKERRIIAAMAVFFQVA------TKDNIAAEPIIAGLKRV- 219

  Fly   546 QGLMLSWRSDVNSRQDRYEVHYQRNGTREERTMATNETSLTIHYLHP---GSGYEVKVHAISHGV 607
                               ||:::.         ||..|..:..|.|   ||.|.          
Zfish   220 -------------------VHHEKE---------TNLGSFILRDLLPSSLGSYYR---------- 246

  Fly   608 RSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQ---------APEGSDFSEYVVRYRTDASPWQ 663
                  |..::...|...:....:.:..|.|.:.         ..|..|..:.|...|.:..|.|
Zfish   247 ------YTGSLTTPPCSKVVEWIIFSRPVYLSYHQLEAFYSIFTTEQQDHVKSVDYLRNNHRPIQ 305

  Fly   664 RISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHPLELNVTMPPQPVSNVVPLVDSRNLTLEW 728
            .:......::.:.|....|......:|.:..|.|..|..:.:    .|::...       |.|.|
Zfish   306 DLDSRRIFKSALMDAWMPETMASAADTETSRVCSSIPDNMKL----HPLNRTA-------LVLTW 359

  Fly   729 PRPDG--H---VDFYTLKWWPTDEEDRVEF-KNVTQLEDLSSPSVRIPIEDLSPGRQYRFEVQAS 787
            .||..  |   |.|.....|..||   :.| |..||   .|..|.|..|..:||...|.|.||| 
Zfish   360 DRPSAVYHPPIVGFLVSYSWVKDE---MPFEKTFTQ---SSEHSTRAVITLVSPDVLYLFRVQA- 417

  Fly   788 SNGIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPADSTR-FDIYRF-SMGDPT 850
                             |.|.|         |..|.:.||.:   .|::|| |:..|. ..|.||
Zfish   418 -----------------LCQRD---------QRSDFSQTLLF---KANTTRIFEGTRIVKTGMPT 453

  Fly   851 IKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLHPLPISDLKAIQVAARE 915
            :..    |:..:.....||        .:.||.:|               ||.|   .:.:|.  
Zfish   454 VSP----ASSADMAPISSG--------SSTWTSAG---------------LPFS---FVSMAT-- 486

  Fly   916 ITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHN---YTFTVVVRSGSIQ 977
                                                      |:.|..:   .|...||.|..:.
Zfish   487 ------------------------------------------GMGPPSSGGQATVASVVTSTLLA 509

  Fly   978 GTDFADVSVSTLMRSSAPISASYQTLTAP-PGKVDYFQPSDVQPGEVTFEW--SLEPAEQHGPID 1039
            |..|:...:|:|..|..|   ::.|.|.| |.:......::..|.|.:.:.  .||..|:|    
Zfish   510 GLGFSGSVISSLPGSFWP---THSTNTGPSPTQHPATPTAENSPSEDSTDTQNKLEEEEEH---- 567

  Fly  1040 YFRITCQNADDAADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSALGYGAEREHIQTMPILAP 1104
                  :..||..:....|......:.|            :.:.|..    ..::..||:.....
Zfish   568 ------KKEDDEEEEEEEEEEEQRDEEK------------KKKGKDV----TVKDKKQTVQKPTA 610

  Fly  1105 PVP-------------EPSVTPLEV-SRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNAS 1155
            |:|             ..::||.|| .:.|...|   |..                |||..|   
Zfish   611 PIPTSKHRDRERPDAESSTLTPAEVEEQVSGATE---RPD----------------AEDSSK--- 653

  Fly  1156 GLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRA 1220
                .:|||.....:              .|:.:..|.|..|.                    :|
Zfish   654 ----ATWQDDNDMQI--------------PSSSTESSKLSDEE--------------------KA 680

  Fly  1221 GTTYRIKIRAFTDEDKFTDTVYSSPITTERSDTVIVAATVSAVLLVAMVL---VVVYCQHRCQ-- 1280
            ...|.|.    |:.:..:.....|..::.|.:.:|....|||:.|:.:::   |:||.:...|  
Zfish   681 NWPYYIN----TERNSISTVSRDSVSSSSRMEWIIPLMVVSALTLLCLIMLLAVLVYWRRFFQTA 741

  Fly  1281 -----------LIRRAS-KLARMQDELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFSEEF 1333
                       :|...| .:....|:|.|:|           |:.|.:|...:.:::...||:||
Zfish   742 HFYIEDRNSPRVIHNDSFPIISTADDLEAMP-----------VRQFIKHIMELHSNNRHGFSQEF 795

  Fly  1334 EELKHVGRDQ--ACSFANLPCNRPKNRFTNILPYDHSRFKLQ--PVDDDDGSDYINANYMPGHNS 1394
            :|::|...:.  ....:|.|.|:.|||:.||:.|||||.|||  |..|...||||||||:.|:..
Zfish   796 DEVQHCTSEMKITAEHSNHPENKHKNRYINIVAYDHSRVKLQQLPGKDSKHSDYINANYVDGYKR 860

  Fly  1395 PREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLI 1459
            .|.:|..||||.||.|:||||.||.|:..|||:|...||||.|||||||.:. :..||:|.|.|.
Zfish   861 ARAYIAAQGPLKSTFEDFWRMIWEQNTTVIVMITNLVEKGRRKCDQYWPSEN-SEVYGNIMVTLK 924

  Fly  1460 IDTHYHDWSISEFMVSRNCE----------SRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVI 1514
            ....|..:::..|:| ||.:          .|::..:|:|.|||.||||....:::|:.......
Zfish   925 STKVYAYYTLRHFIV-RNSKLKKGQKGRQNERLVLQYHYTQWPDMGVPEYTLPVLKFISRSTVTH 988

  Fly  1515 GTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQ 1579
            .:...|::|||||||||:||:|.:|.:|:.|.....|::.|.:..:|::|.::||||:|::.||.
Zfish   989 ASSTGPVLVHCSAGVGRTGTYIVIDSMLKQIKDRGSVNVLGFLKHIREQRNYLVQTEEQFIFIHD 1053

  Fly  1580 CLLAVLEGKEHLLADSLELHANDGYEVTKIYLERQP--QTKMG---TLPIRASLAMAEKLDADLM 1639
            .|:      |.:|:...|:.|...:..|...|...|  .|:|.   .|..:.:..:||.|.....
Zfish  1054 ALM------EAVLSKDTEVSAWQLHTYTNSLLTPSPTGHTRMDKHFKLLTQCNAHLAECLSGQKE 1112

  Fly  1640 TNKDEDEDQEQQQQQQLQLATEVKP--KGSN 1668
            .||:::........::.::|....|  ||::
Zfish  1113 CNKEKNRTSAVLPTERARVALSPLPGLKGTD 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628 80/414 (19%)
fn3 708..796 CDD:394996 27/93 (29%)
fn3 902..978 CDD:394996 9/78 (12%)
fn3 1013..1092 CDD:394996 11/80 (14%)
PTP_tm 1127..1247 CDD:465889 17/119 (14%)
R3-PTPc 1358..1579 CDD:350396 100/232 (43%)
ca16bXP_021332937.1 alpha_CARP_receptor_like 62..314 CDD:239396 57/316 (18%)
FN3 340..417 CDD:214495 26/93 (28%)
PTP_DSP_cys 791..1060 CDD:475123 114/276 (41%)
R-PTP-G-2 1144..1348 CDD:350508 325/1396 (23%)
Blue background indicates that the domain is not in the aligned region.

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