DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and ptpn2b

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_997819.1 Gene:ptpn2b / 561613 ZFINID:ZDB-GENE-030909-8 Length:393 Species:Danio rerio


Alignment Length:398 Identity:131/398 - (32%)
Similarity:207/398 - (52%) Gaps:45/398 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1324 DSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANY 1388
            ||:.|:...:.|:::...:.|...|..|.||.:||:.::.|:||||.||:..:    :|||||:.
Zfish     9 DSEGRWQNIYLEIRNQSHECAFKVAKYPENRIRNRYRDVSPFDHSRVKLENTE----NDYINASL 69

  Fly  1389 MPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPV-DRVAMFYG 1452
            :....:.|.:|:|||||.:|...||.|.||..::|::||.|..|||.|||.||||. :...|.:.
Zfish    70 VVMEEAQRRYILTQGPLRNTCGHFWLMIWEQKTKAVIMLNRVIEKGSEKCAQYWPTQEEREMSFR 134

  Fly  1453 DIK--VQLIID--THYHDWSISEFMVSRNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRD- 1512
            |.:  |.|:.:  ..|:...:.|...:...|:|.:.|||:||||||||||.|.|.:.|:...|: 
Zfish   135 DTRFVVTLVSEDVKSYYTTRVLELQNANTGETREIYHFHYTTWPDFGVPESPASFLNFLFKVRES 199

  Fly  1513 -VIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSD---YVDIFGIVFAMRKERVFMVQTEQQ 1573
             .:|.:..|.:||||||:||||||..:|..|..:.|..   .|||..|:..|||.|:.::||..|
Zfish   200 GSLGMEQGPAVVHCSAGIGRSGTFSLVDTCLVLMDKRKDPLLVDIKKILLDMRKYRMGLIQTPDQ 264

  Fly  1574 YVCIHQCLLAVLEGKEHLLADS------LELHANDGYEVTKIYLERQP----QTKMGTLPIRASL 1628
               :....:|||||.::::.||      .||...|...:::.....||    :...|:.|..   
Zfish   265 ---LRFSYMAVLEGAKYIMGDSSVQKQWRELSREDQEPLSESPPPPQPPKCTERYNGSKPAH--- 323

  Fly  1629 AMAEKLDADL-------MTNKDEDEDQEQQQQQQLQLATEVKPKGSNDDEEDEEDDDD--DDDDQ 1684
             :.:.:|:..       ..||:.|.|...|.:::|:     ..|.||..::.::....  :|.|:
Zfish   324 -LEDGIDSKTGKKTGPEAPNKEPDRDAGTQARKRLR-----DEKMSNPSQKTQKQTKPRINDPDK 382

  Fly  1685 QPLNNETT 1692
            :.....||
Zfish   383 KRKRARTT 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 93/230 (40%)
ptpn2bNP_997819.1 PTP_DSP_cys 15..272 CDD:475123 100/263 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.