DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpn18

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_068079039.1 Gene:ptpn18 / 541324 ZFINID:ZDB-GENE-050320-12 Length:514 Species:Danio rerio


Alignment Length:467 Identity:126/467 - (26%)
Similarity:198/467 - (42%) Gaps:102/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1353 NRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCW 1417
            |..|||:.:|||||.:|..|.|...:..|||||||::.|....|.:|.|||||.||..:||||.|
Zfish    57 NVKKNRYRDILPYDQTRVCLTPTTSEYQSDYINANFVKGAVRNRTYIATQGPLSSTVVDFWRMIW 121

  Fly  1418 ESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNC-ESR 1481
            :.|.:.|:|..|..|.|::||:.||.........|...|..:.::..::..|...:|...| |:|
Zfish   122 QHNVKVIIMACREIEMGKKKCEVYWASTSDTSTLGPFTVSTLEESRPNEEVIVRTLVVNYCDEAR 186

  Fly  1482 IMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRI----L 1542
            .:.||.:|.|||.|:|:.|..::..:...|...|....|:::|||||.||:|...|:|.:    |
Zfish   187 KVSHFQYTAWPDHGIPDMPDGILGMMELARQKQGNQTDPVVIHCSAGCGRTGVICAVDYVNDLLL 251

  Fly  1543 QHIHKSDYVDIFGIVFAMRKERVFMVQTEQQY----VCIHQCLLAVLEGKEHLLADSLELHANDG 1603
            ....:.|: :|..:|..:|::|...|||::||    ..:.|.....||.| ::.||         
Zfish   252 TEQIQEDF-NILDLVLELRRQRPSAVQTKEQYGFVFHTVAQMFQKALEMK-NMNAD--------- 305

  Fly  1604 YEVTKIYLERQP----QTKMGTLPIRA-------------SLAMAEKLDADLMTNKDE------- 1644
               |.:|:...|    |......|.||             ||..:...|...:.||.:       
Zfish   306 ---TSLYINAVPPKISQKSASLAPARAPAKTRNPHLKPRLSLPQSTMNDTYAVINKSKVQAPNSA 367

  Fly  1645 ---------DEDQEQQQQQQLQLATEVKPKGSNDDEEDEEDDDDDDDDQQPLNNETTATLSSASC 1700
                     |....::.......:| ||||                          |..:|:...
Zfish   368 PHSVTVHFYDNANSEKTNNSAVYST-VKPK--------------------------TRPVSAMPL 405

  Fly  1701 S-SSTHDVHVVLQE----AIEKPKQEQERICAG--------TQSH------ADTESDNTDSDDDD 1746
            | |..||..:...:    :::|.:.:...:..|        :|.|      :.:.:::..|.|||
Zfish   406 SPSPIHDRPMPANQRGGLSLKKMESDGYELLPGELRSMNRDSQPHGPPLSRSPSATESQSSTDDD 470

  Fly  1747 EDGDGKVAKDGA 1758
            .:....|.|||:
Zfish   471 YEYVSSVVKDGS 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 81/229 (35%)
ptpn18XP_068079039.1 PTPc-N18 28..293 CDD:350451 85/236 (36%)
Blue background indicates that the domain is not in the aligned region.

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