DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpro

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001077283.1 Gene:ptpro / 407676 ZFINID:ZDB-GENE-070424-54 Length:1238 Species:Danio rerio


Alignment Length:1360 Identity:347/1360 - (25%)
Similarity:564/1360 - (41%) Gaps:340/1360 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 VRSLGGF-------------LDD-------RSNALHISWEPAETGRQDSYRISYHEQTNASEVPA 481
            ::|..||             |||       ...|:.:|.||.      ::.:.:.:..:|..:|.
Zfish    16 IQSAAGFRVQLQDGVRMLMSLDDGDIGPGVSEYAVRVSGEPL------THTLLFQQAADAHTLPE 74

  Fly   482 P--FPVAAESQITTNLTEYTLDSLLAGRRYLIAVQALSKGVASNASDITRYT-RPAAPLIQELRS 543
            |  |..:....:      |::..:..||.:... ..:::.:..::.::..|. .|...::.::||
Zfish    75 PLLFNASYHGLL------YSISLMTDGRTHTTR-SIITQPLPLDSVEMWDYAPSPETAVVFQIRS 132

  Fly   544 IDQGLMLSWRSDVNSRQDRYEVHYQRNGTREERTMATNETSLTIHYLHPGSGYEVKVHAISHGV- 607
            .|:.:.           .|..:.|...  .:.|.|...:      :||   |..|..|.:| || 
Zfish   133 PDRNIF-----------TRVNISYTEG--HQRRYMLYKD------FLH---GKTVFKHWLS-GVC 174

  Fly   608 ---------------------RSE-PHSYFQ-AVFPKPPQNLTLQTVHTNLVVLHWQAPEGSDFS 649
                                 ||: .|:..| ...|.||.|::|:.:|     |..:.|.|...:
Zfish   175 YSNITFQLISEASVNRSALLSRSDITHNPQQHRTVPNPPLNVSLKILH-----LSGRGPPGPVLT 234

  Fly   650 EYVVRYRTDASPWQRISGL--HENEARIKDMHYGERYL--VQVNTVSFGVESPHPLELNVTMPPQ 710
            ..:::...:||..:|...|  :|.:....|....|..|  .|:|.    .||.:..|      .:
Zfish   235 GAILKNSHNASVVRRERDLPEYEEQEPTSDTLNTESNLTHTQLNQ----SESENESE------SE 289

  Fly   711 PVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKN--VTQLEDLSSP--SVRIPI 771
            ||: ..|.::|...:| |.       :.|:...||:||:. .|.|  |.:.||.:.|  ::.||:
Zfish   290 PVT-AEPTLNSSTQSL-WA-------WQTVSPAPTEEEEE-GFVNALVPEYEDSNEPGSALGIPL 344

  Fly   772 EDL----------------------SPGRQY-RFEVQASSNGIRSGTTHLSTRT----MPLIQSD 809
            |..                      :|...| .|.:....||..:.|..:...|    ..|.:|.
Zfish   345 EPAVMPAVMPTPLAPVLLQLRWSPPAPHTAYDAFNIYIYRNGNSTETATVDENTHEFLAELSESG 409

  Fly   810 VF------IANAGH-----------------------EQGQD------------ETITLSYTPT- 832
            .:      :::||.                       ||.|:            .|..:|:.|: 
Zfish   410 TYRIHVTTLSSAGDCEARESSANTAFTFYLSPSGEWMEQPQERPQAVSVKMLDSSTAAVSWAPST 474

  Fly   833 -PADSTRFDIYRFSMGDPTIKDKEKLANDTERKLS---FSGLTPGKLYNVTVWTVSGGV---ASL 890
             ..:.:...:...:...|:|..:.:|...:|..::   .|.||||..|.|.|:..:|.:   ||.
Zfish   475 HTYNGSLISVQSLTCLRPSISQRMELNYCSEENITSDIISSLTPGAQYRVVVYHTNGPLVSPASE 539

  Fly   891 PVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEIT 955
            ||  :..:.|..:.||....::...:.|.|..|   |.....:|         :||....|:...
Zfish   540 PV--IIDIEPTGVRDLVVYPLSPSAVILSWQRP---YNVAFRKY---------VLQTFFFNSATQ 590

  Fly   956 LQGLRPYHNYTFTVVVRSGSIQGTD-----FADVSVSTLMRSSAPIS----ASYQTLTAPPGKVD 1011
            ......|:....|..| ..|::.||     |.:..|:.:.....|:|    ::...:|||  :..
Zfish   591 TAQWSTYYEIAATASV-IASVRVTDLLPAWFYNFRVTMVTWGDPPLSCCDTSTVSFITAP--EAP 652

  Fly  1012 YFQPSDVQPGEVTFEWS---LEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKID---G 1070
            :....:...|.|...|:   |.....|..:.::::..:....|    ...|.|:.|:..:.   .
Zfish   653 HISSVEFSHGSVFVRWTYGDLFTDLTHSRMLHWQVVAEGKKSA----RRRFSVDVTRSVMKASLA 713

  Fly  1071 LVPGNHYIFRIQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNA 1135
            |..|:.|...:.|.:.........||..:    .|.|..|:..:..|.||.|:        ....
Zfish   714 LPAGDIYNLTVTACTERSCNTSAPHIMKL----DPAPPRSLYAVNASDTSVTL--------IWAE 766

  Fly  1136 HGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFT 1200
            .|:|..| :|....:|.:|...::                    ..|.:||         |...|
Zfish   767 EGVVDHY-LITCRALGAHAEQKKV--------------------REPLVTS---------AHVLT 801

  Fly  1201 IGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITTER----SDTVIVAATVS 1261
            :              ..|:|.|||...:|: :.....:|.|:.:..||.|    |...|.|..|.
Zfish   802 V--------------SGLQASTTYNCSVRS-SSYSSSSDPVHITVSTTVREMNPSVAAISALAVL 851

  Fly  1262 AVLLVAMV---LVVVYCQHRCQLIRRAS-----KLARMQDE--------------LAALPE---- 1300
            :|||::::   |:|:..:| .:|.|...     ..|..:.:              |..||.    
Zfish   852 SVLLISLLVLFLLVLRKKH-MELSRECGAETFVNFASFERDGKLPYNWRRSLFAFLTLLPSCLWT 915

  Fly  1301 -----GYITP-----------NRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFAN 1349
                 .||.|           ..||.:.||..:.:.|..||.::||.:|||||.||.|.:...|:
Zfish   916 DYLLAFYINPWSKTALKKRKLTSPVQLSDFEAYLKDMGKDSAYKFSLQFEELKSVGLDLSHEAAD 980

  Fly  1350 LPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWR 1414
            ||.||||||:|||||||.||.||..:.:|:|||||||||:||:|||||:|.|||||..||.:||:
Zfish   981 LPINRPKNRYTNILPYDFSRVKLISLHNDEGSDYINANYIPGYNSPREYIATQGPLPDTRNDFWK 1045

  Fly  1415 MCWESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCE 1479
            |..:.....|||||:|.|:.|.|||.|||.....:.||:|.|:::.:|...:|:|..|.::...|
Zfish  1046 MVLQQKVHIIVMLTQCNERRRVKCDHYWPFSDEPVAYGEISVEMLAETDSPEWTIRSFRLAYADE 1110

  Fly  1480 SRIMRHFHFTTWPDFGVP--EPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRIL 1542
            ::.:.||::|:|||.|||  ...:|:::||:..|..:.....||:|||||||||:||||:|||::
Zfish  1111 TQDVLHFNYTSWPDHGVPTVNAIESILQFVQIVRQQVNRSKGPIVVHCSAGVGRTGTFISLDRLM 1175

  Fly  1543 QHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSLELHAND 1602
            |||.:.:|||:.|:|..||..|:.|||||:|||.||||:|.:.:.|:.      :.|.:|
Zfish  1176 QHIQEHEYVDVLGLVSDMRSHRLSMVQTEEQYVFIHQCVLLMWKKKKQ------QSHTSD 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628 70/362 (19%)
fn3 708..796 CDD:394996 25/114 (22%)
fn3 902..978 CDD:394996 14/75 (19%)
fn3 1013..1092 CDD:394996 13/84 (15%)
PTP_tm 1127..1247 CDD:465889 19/119 (16%)
R3-PTPc 1358..1579 CDD:350396 114/222 (51%)
ptproNP_001077283.1 FN3 <367..>628 CDD:442628 53/275 (19%)
FN3 547..647 CDD:238020 21/112 (19%)
FN3 744..812 CDD:214495 22/119 (18%)
R-PTPc-O 973..1217 CDD:350462 127/243 (52%)
Blue background indicates that the domain is not in the aligned region.

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