DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpn1

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_570999.2 Gene:ptpn1 / 30081 ZFINID:ZDB-GENE-980605-23 Length:433 Species:Danio rerio


Alignment Length:298 Identity:109/298 - (36%)
Similarity:166/298 - (55%) Gaps:42/298 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1324 DSDFR-------FSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGS 1381
            :::||       :::.::|::....|..|..|.||.||.:||:.::.|:||||..||    ...:
Zfish     2 EAEFREIDEHGNWNDVYQEIRQQSSDLPCKIAKLPENRSRNRYRDVSPFDHSRICLQ----IGCN 62

  Fly  1382 DYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP--V 1444
            |||||:.:....:.|::|:|||||.:|...||.|.||..||.:|||.|..|||..||.||||  .
Zfish    63 DYINASLISVEEAQRKYILTQGPLPNTCGHFWEMVWEQRSRGVVMLNRVIEKGSVKCAQYWPQRE 127

  Fly  1445 DRVAMFYGDIKVQLIIDTHYHDWSISEFMVS------------RNCESRIMRHFHFTTWPDFGVP 1497
            :|.|:|.         ||::....|||.:.|            ...|:|.:.|||:|||||||||
Zfish   128 EREAVFE---------DTNFRLTLISEDVKSYYTVRQLELENLSTQETREILHFHYTTWPDFGVP 183

  Fly  1498 EPPQSLVRFVRAFRD--VIGTDMRPIIVHCSAGVGRSGTFIALDR-ILQHIHKSD--YVDIFGIV 1557
            |.|.|.:.|:...|:  .:..::.|::||||||:||||||..:|. :|....:.|  .|.|..::
Zfish   184 ESPASFLNFLFKVRESGCLSPELGPVVVHCSAGIGRSGTFCLVDTCLLLMSQRKDPSSVRIQEVL 248

  Fly  1558 FAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADS 1595
            ..||:.|:.::||..|   :....||.:||.::::.|:
Zfish   249 LEMRRYRMGLIQTADQ---LRFSYLAFIEGAKYIMGDT 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 93/239 (39%)
ptpn1NP_570999.2 PTPc-N1 14..290 CDD:350456 107/286 (37%)
Blue background indicates that the domain is not in the aligned region.

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