DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptprs

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_038938986.1 Gene:Ptprs / 25529 RGDID:3452 Length:1916 Species:Rattus norvegicus


Alignment Length:1835 Identity:421/1835 - (22%)
Similarity:652/1835 - (35%) Gaps:541/1835 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VGILTIFLAQHANAADLVINVPNASSNANAFYRIDYSPPFGFPEPNTTIPASDIGKDIKFSRALP 122
            ||.:|:    ||....|               |.|..|| |||.       .|:|..:|   .:.
  Rat   113 VGEITV----HAKLTVL---------------REDQLPP-GFPN-------IDMGPQLK---VVE 147

  Fly   123 GTEYNFWLYYTNSTHREQLTWTVNITTAPDPPANLSVQLRSSKSAFITWRPPGSGRYSGFRIRVL 187
            .|.....|...:.....::||..:.... ||.|:                   :||....|    
  Rat   148 RTRTATMLCAASGNPDPEITWFKDFLPV-DPSAS-------------------NGRIKQLR---- 188

  Fly   188 GLTDLPFERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQGKESVAYTSRNFTTKPNTPGKFIV 252
                           :..||:.:.|.|..|.|:    .|......|.|:|               
  Rat   189 ---------------SGALQIESSEETDQGKYE----CVATNSAGVRYSS--------------- 219

  Fly   253 WFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLYVEREGEPPGPAQAAFKGLVPGREYNI 317
                            ||.:|...| .:.|.   .|:|.:..|             ::||...||
  Rat   220 ----------------PANLYVRVR-RVAPR---FSILPMSHE-------------IMPGGNVNI 251

  Fly   318 SVQTV------------SED--------------ETSSVPTTARY-------LTVPERVLNVTFD 349
            :...|            :||              |.:.|..:|.|       |.|.|.|..:|..
  Rat   252 TCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVK 316

  Fly   350 E----------AYTTSSSFRVRWE----PPRTY--------SEFDAYQVM--LSTSRRIFNVPRA 390
            .          ...|::|..|.|:    .|.:|        |:...||:.  ::|:|      .:
  Rat   317 SLPKAPGTPVVTENTATSITVTWDSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTR------YS 375

  Fly   391 ANGDSVYFDYPDILEPGRTYEVVVKTIADNVNSWPASGEVTLR---------PRPV--RSLGGFL 444
            ..|          |.|...||:.|..: :::...|.|..|..|         ||.|  |.|.   
  Rat   376 IGG----------LSPNSEYEIWVSAV-NSIGQGPPSESVVTRTGEQAPASAPRNVQARMLS--- 426

  Fly   445 DDRSNALHISW-EPAE-TGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGR 507
               :..:.:.| ||.| .|....||:.|     ..|...|.....:..:..:|.. |:.|||...
  Rat   427 ---ATTMIVQWEEPVEPNGLIRGYRVYY-----TMEPEHPVGNWQKHNVDDSLLT-TVGSLLEDE 482

  Fly   508 RYLIAVQALSK---GVASNASDI-TRYTRPAAP--LIQELRSIDQGLMLSWRSDVNSRQDRYEVH 566
            .|.:.|.|.:.   |..|:...: |:...|..|  |..|.:| :..:.|||.:.......:||:.
  Rat   483 TYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLRAEAKS-ETSIGLSWSAPRQESVIKYELL 546

  Fly   567 YQRNGTREERTMATNE--TSLTIHYLHPGSGYEVKVHAIS-HG-------VRSEPHSYFQAVFPK 621
            : |.|.|......|.:  |:..:..|.|.:.|..::.|.| .|       ||...   .||....
  Rat   547 F-REGDRGREVGRTFDPTTAFVVEDLKPNTEYAFRLAARSPQGLGAFTAVVRQRT---LQAKPSA 607

  Fly   622 PPQNLTLQTVHTNLVVLHWQAP----EGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGE 682
            |||::...::.:..:::.|:.|    .......|.||||                          
  Rat   608 PPQDVKCTSLRSTAILVSWRPPPPETHNGALVGYSVRYR-------------------------- 646

  Fly   683 RYLVQVNTVSFGVESPHPLELNVTMPPQPVSNVVPLVDSRNLTLEW--------------PRPDG 733
                     ..|.|.|.|.|:| .:||.....::..::      :|              |.|:.
  Rat   647 ---------PLGSEDPDPKEVN-NIPPTTTQILLEALE------KWTEYRVTAVAYTEVGPGPES 695

  Fly   734 HVDFYTLKWWP----TDEEDRVEFKNVTQLEDLSSPSVRIPIEDLSPGRQYRFEVQASSNGIRSG 794
            .         |    |||:.........:.|.|::.::|:.....:||||:        ..||..
  Rat   696 S---------PVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPTPGRQH--------GQIRGY 743

  Fly   795 TTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPADSTRFDIYRFSMGDPTIKD------ 853
            ..|             ::...|.|                          :.|.|.|||      
  Rat   744 QVH-------------YVRMEGAE--------------------------ARGPPRIKDIMLADA 769

  Fly   854 KEKLANDTERKLSFSGLTPGKLYNVTV--WTVSG-GVASLPVQRLYRLHPLPISDLKAIQVAARE 915
            :.::.:..|.::..:.|.|...|::||  :|:.| |..|.|...:.:...|....|...|.....
  Rat   770 QWEMDDTAEYEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVLGRPTLSVQQTPEGS 834

  Fly   916 ITLHWTAPAGEYTD----FELQYLSADEEAPQLLQNVTKNTEITLQGLRPYH---NYTFTVVVRS 973
            :...|..||....|    :.||: ..::.||..|:.........    .|.|   .|.|.:..|.
  Rat   835 LLARWEPPADAAEDPVLGYRLQF-GREDAAPATLELAAWERRFA----APAHKGATYVFRLAARG 894

  Fly   974 GSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEW-SLEPAEQHGP 1037
            .:..|   .:.|.:..:...||  ..:..:....|        :|..|.|...| ...|||::|.
  Rat   895 RAGLG---EEASAALSIPEDAP--RGFPQILGAAG--------NVSAGSVILRWLPPVPAERNGA 946

  Fly  1038 IDYFRITCQNADDAADVSSYEFPVNATQG-----KIDGLVPGNHYIFRIQAKSALG--------- 1088
            |..:.::.:.|......:..|....|..|     .:.||.|...|..|::|.:..|         
  Rat   947 IIKYTVSVREAGAPGPATETELAAAAQPGAETALTLQGLRPETAYELRVRAHTRRGPGPFSPPLR 1011

  Fly  1089 YGAEREHI-----------QTMPILAPPVPE--PSVTPLEVSRTSSTIEISFRQGYFSNAHGMVR 1140
            |...|:.:           :|..:|:...|:  .|.||.::.....|:::..|.......|....
  Rat  1012 YRLARDPVSPKNFKVKMIMKTSVLLSWEFPDNYNSPTPYKIQYNGLTLDVDGRTTKKLITHLKPH 1076

  Fly  1141 SYTIIIAEDVGKNASGLEMPSWQDVQAYT----------------------VWLP--YQAIEPYN 1181
            ::...:..:.|.:..||:    |.|.|.|                      |:||  ...:...|
  Rat  1077 TFYNFVLTNRGSSLGGLQ----QTVTARTAFNMLSGKPSVAPKPDNDGSIVVYLPDGQSPVTVQN 1137

  Fly  1182 PFLTSNGSRKS------------------------------------SLE------AEHFTIGTA 1204
            .|:.....|||                                    .||      |..|:|..|
  Rat  1138 YFIVMVPLRKSRGGQFPILLGSPEDMDLEELIQDLSRLQRRSLRHSRQLEVPRPYIAARFSILPA 1202

  Fly  1205 ----NCDKHQAGYCNGPLRAGTTYRIKIRAF--TDEDKFTDTVYSSPITTERSDTV--------- 1254
                ...|...|:.|..|..|..|.:.:.|.  .:|..|..:.:|.|...:..|..         
  Rat  1203 VFHPGNQKQYGGFDNRGLEPGHRYVLFVLAVLQKNEPTFAASPFSDPFQLDNPDPQPIVDGEEGL 1267

  Fly  1255 --IVAATVSAVLLVAMVLVVVYCQHRCQLIRRASK-----------LA--RMQDELAALPEGYIT 1304
              ::...::.|.::.:|:.::..:::....|:.|:           ||  ..:|.:......:.|
  Rat  1268 IWVIGPVLAVVFIICIVIAILLYKNKPDSKRKDSEPRTKCLLNNADLAPHHPKDPVEMRRINFQT 1332

  Fly  1305 P----NRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPY 1365
            |    :.|:.:.|.:||...:.|:...:.|:|:|.: ..|:......:||..|:||||:.|::.|
  Rat  1333 PGMLSHPPIPITDMAEHMERLKANDSLKLSQEYESI-DPGQQFTWEHSNLEANKPKNRYANVIAY 1396

  Fly  1366 DHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRC 1430
            ||||..|||::...|||||||||:.|:.....:|.|||||..|..:||||.||..|..:||:||.
  Rat  1397 DHSRVILQPLEGIMGSDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRL 1461

  Fly  1431 FEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRN--CESRIMRHFHFTTWPD 1493
            .||.|.||||||| :|....||.|:|.|:.......:.:..|.:.:|  .|.|.:|||.||.|||
  Rat  1462 EEKSRVKCDQYWP-NRGTETYGFIQVTLLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPD 1525

  Fly  1494 FGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVF 1558
            .||||.|...:.|:|..:.....|..|::|||||||||:|.||.:|.:|:.|.....||::|.|.
  Rat  1526 HGVPEYPTPFLAFLRRVKTCNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERIRTEKTVDVYGHVT 1590

  Fly  1559 AMRKERVFMVQTEQQYVCIHQCLL-AVLEGKEHLLADSLELH------ANDGYEVTKIYLE--RQ 1614
            .||.:|.:|||||.||..||:.|| ||..|...:.|.||..:      ...|..||.:.||  |.
  Rat  1591 LMRSQRNYMVQTEDQYSFIHEALLEAVGCGNTEVPARSLYTYIQKLAQVEPGEHVTGMELEFKRL 1655

  Fly  1615 PQTKMGTLP-IRASL 1628
            ..:|..|.. |.|||
  Rat  1656 ASSKAHTSRFITASL 1670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628 45/265 (17%)
fn3 247..328 CDD:394996 16/106 (15%)
FN3 319..>749 CDD:442628 109/537 (20%)
fn3 708..796 CDD:394996 18/105 (17%)
fn3 902..978 CDD:394996 16/82 (20%)
fn3 1013..1092 CDD:394996 21/93 (23%)
PTP_tm 1127..1247 CDD:465889 34/191 (18%)
R3-PTPc 1358..1579 CDD:350396 105/222 (47%)
PtprsXP_038938986.1 I-set 33..124 CDD:400151 5/14 (36%)
Ig strand B 50..54 CDD:409570
Ig strand C 63..67 CDD:409570
Ig strand E 86..93 CDD:409570
Ig strand F 104..109 CDD:409570
Ig strand G 117..120 CDD:409570 1/6 (17%)
IgI_2_RPTP_IIa_LAR_like 137..226 CDD:409400 26/165 (16%)
Ig strand A' 143..147 CDD:409400 1/6 (17%)
Ig strand B 150..159 CDD:409400 1/8 (13%)
Ig strand C 164..170 CDD:409400 2/5 (40%)
Ig strand C' 172..174 CDD:409400 0/1 (0%)
Ig strand D 183..187 CDD:409400 1/3 (33%)
Ig strand E 190..195 CDD:409400 2/4 (50%)
Ig strand F 204..211 CDD:409400 2/10 (20%)
Ig strand G 214..225 CDD:409400 5/41 (12%)
IgI_3_RPTP_IIa_LAR_like 235..316 CDD:409401 19/93 (20%)
Ig strand A 235..237 CDD:409401 1/1 (100%)
Ig strand A' 241..245 CDD:409401 1/16 (6%)
Ig strand B 248..256 CDD:409401 2/7 (29%)
Ig strand C 261..267 CDD:409401 0/5 (0%)
Ig strand C' 269..271 CDD:409401 0/1 (0%)
Ig strand D 274..278 CDD:409401 0/3 (0%)
Ig strand E 283..288 CDD:409401 1/4 (25%)
Ig strand F 295..302 CDD:409401 1/6 (17%)
Ig strand G 306..315 CDD:409401 3/8 (38%)
FN3 309..>711 CDD:442628 99/486 (20%)
FN3 710..815 CDD:238020 28/151 (19%)
FN3 823..899 CDD:214495 16/80 (20%)
FN3 925..1013 CDD:238020 20/87 (23%)
FN3 1018..1101 CDD:238020 15/86 (17%)
R-PTPc-S-1 1338..1619 CDD:350473 125/282 (44%)
R-PTP-S-2 1621..1910 CDD:350475 15/50 (30%)
Blue background indicates that the domain is not in the aligned region.

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