DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and pyp3

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_594934.1 Gene:pyp3 / 2541443 PomBaseID:SPAC11E3.09 Length:303 Species:Schizosaccharomyces pombe


Alignment Length:253 Identity:94/253 - (37%)
Similarity:147/253 - (58%) Gaps:20/253 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1356 KNRFTNILPYDHSRFKLQPVDDDDGSDYINANY--MPGHNSPREFIVTQGPLHSTREEFWRMCWE 1418
            :||::||:||:::|.:|.|: ..:..|||||:.  :|   |.:.||.||||..::.:.||:|.|:
pombe    52 RNRYSNIVPYENTRVRLDPM-WKEACDYINASIVKIP---SGKTFIATQGPTSNSIDVFWKMVWQ 112

  Fly  1419 S--NSRAIVMLTRCFEKGREKCDQYWPVDRV-AMFYGDIKVQLI---IDTHYHDWSISEFMVSRN 1477
            |  .|..|||||:..|:.|.|||.||||:.. .:..||:.|.|:   ..|..::..:.||.::::
pombe   113 SVPKSGIIVMLTKLRERHRLKCDIYWPVELFETLNIGDLSVILVKVYTLTSLNEVQVREFELNKD 177

  Fly  1478 CESRIMRHFHFTTWPDFGVPEPPQ--SLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDR 1540
            ...:.:.||::..|||||.|....  ||.|::::.......:..|||||||||.||:|||:||..
pombe   178 GVKKKILHFYYNGWPDFGAPHTFSLLSLTRYIKSLSYSPDFETAPIIVHCSAGCGRTGTFMALFE 242

  Fly  1541 ILQH------IHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLL 1592
            ||..      ..|.:..:|..||.::|.:|:..||:..|.|.::.....:|:|||.||
pombe   243 ILSQTDDSTSTSKFEVDNIANIVSSLRSQRMQSVQSVDQLVFLYTVSQELLQGKEFLL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 87/236 (37%)
pyp3NP_594934.1 PTPc 29..288 CDD:214550 88/239 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.