DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpn1

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_036769.1 Gene:Ptpn1 / 24697 RGDID:61965 Length:432 Species:Rattus norvegicus


Alignment Length:417 Identity:131/417 - (31%)
Similarity:207/417 - (49%) Gaps:56/417 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1312 KDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVD 1376
            |:|.:      .|....::..:::::|...|..|..|.||.|:.:||:.::.|:||||.||...|
  Rat     5 KEFEQ------IDKAGNWAAIYQDIRHEASDFPCRIAKLPKNKNRNRYRDVSPFDHSRIKLHQED 63

  Fly  1377 DDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQY 1441
                :|||||:.:....:.|.:|:|||||.:|...||.|.||..||.:|||.|..|||..||.||
  Rat    64 ----NDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRIMEKGSLKCAQY 124

  Fly  1442 WP-VDRVAMFYGD--IKVQLIIDTHYHDWSISEFMVSR--NCESRIMRHFHFTTWPDFGVPEPPQ 1501
            || .:...|.:.|  :|:.||.:.....:::.:..:..  ..|:|.:.|||:||||||||||.|.
  Rat   125 WPQKEEKEMVFDDTNLKLTLISEDVKSYYTVRQLELENLATQEAREILHFHYTTWPDFGVPESPA 189

  Fly  1502 SLVRFVRAFRD--VIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHK---SDYVDIFGIVFAMR 1561
            |.:.|:...|:  .:..:..||:||||||:||||||...|..|..:.|   ...|||..::..||
  Rat   190 SFLNFLFKVRESGSLSPEHGPIVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMR 254

  Fly  1562 KERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSLELHANDGY-EVTKIYLERQPQ-TKMGTLPI 1624
            :.|:.::||..|   :....|||:||.:.::.||   ...|.: |::...||..|: ......|.
  Rat   255 RFRMGLIQTADQ---LRFSYLAVIEGAKFIMGDS---SVQDQWKELSHEDLEPPPEHVPPPPRPP 313

  Fly  1625 RASLAMAEKLDADLMTNKD-------EDED---QEQQQ--------QQQLQLATEVKPK------ 1665
            :.:|........:|.:|..       ||||   :|:.:        ...:...|||:.:      
  Rat   314 KRTLEPHNGKCKELFSNHQWVSEESCEDEDILAREESRAPSIAVHSMSSMSQDTEVRKRMVGGGL 378

  Fly  1666 ----GSNDDEEDEEDDDDDDDDQQPLN 1688
                .|...||:....:::....:|::
  Rat   379 QSAQASVPTEEELSPTEEEQKAHRPVH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 92/230 (40%)
Ptpn1NP_036769.1 PTPc-N1 16..292 CDD:350456 108/285 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..322 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..402 6/51 (12%)
Blue background indicates that the domain is not in the aligned region.

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