DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and ZK354.8

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_500775.1 Gene:ZK354.8 / 191295 WormBaseID:WBGene00022709 Length:483 Species:Caenorhabditis elegans


Alignment Length:265 Identity:93/265 - (35%)
Similarity:139/265 - (52%) Gaps:35/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1342 DQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLH 1406
            |.|.||..   |..:||:.||...|.:|.||    .||...||:||.:....:||.||.||.||:
 Worm   215 DIATSFLG---NPTRNRYRNIPCCDITRVKL----TDDPHFYIHANLVSSGPNPRRFICTQAPLN 272

  Fly  1407 STREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP--------VDRVAMFYGDIKVQLIIDTH 1463
            .|.||||:|...:....||||....|||:.|..:|:|        :.|:.....:.:|.:     
 Worm   273 GTIEEFWKMIIVTGIEYIVMLCELVEKGKPKSAEYFPSQIGQTTKIGRLCTVTKESRVDI----- 332

  Fly  1464 YHDWSI--SEFMVSR---NCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFR--DVIGTDMRPI 1521
              |.::  |...:|:   |...:|::|.|:..|||.|||:      .|:..||  .|:....:||
 Worm   333 --DKTLVMSTMRISKPGDNAVVKIVKHIHWRNWPDHGVPD------NFLSPFRLLTVVKNCTKPI 389

  Fly  1522 IVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLE 1586
            :|||||||||:||...:..||:.|...|::.:..::..:|:||...||||.||:..|:|:|..|.
 Worm   390 VVHCSAGVGRTGTLALILIILESICLPDFIGVPRLLAKLREERFRAVQTEMQYLYAHRCVLEYLA 454

  Fly  1587 GKEHL 1591
            .|:::
 Worm   455 LKKYV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 82/235 (35%)
ZK354.8NP_500775.1 PTPc 200..451 CDD:214550 90/255 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.