DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ida-1

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_498245.2 Gene:ida-1 / 175807 WormBaseID:WBGene00002048 Length:767 Species:Caenorhabditis elegans


Alignment Length:725 Identity:167/725 - (23%)
Similarity:281/725 - (38%) Gaps:185/725 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   980 DFADVSVSTLMRSSAPISASYQT----LTAPPGKVDYFQPSDVQPGEVT-------FEWSLEPA- 1032
            ||..|      |..|.:.|..|.    ||..|..:|    .||.|..||       .|...||: 
 Worm   110 DFCQV------RKPANVWALIQLIDTGLTEDPTILD----EDVNPENVTDEDMAQIIEQLKEPSL 164

  Fly  1033 -----------EQHGPID------YFRITCQNAD-DAADVSSYEFPVNATQGKIDGLVPGNHYIF 1079
                       .|:..:|      |.:....|.: |.:::|..:  :|...|:   ||.....:.
 Worm   165 PTEEDIEEALNAQNEDVDDEILDQYVQAVVNNENPDFSELSDGQ--LNILIGR---LVDLKKNVE 224

  Fly  1080 RIQAKSALGYGAEREHIQTMPILAPPVP------EPSVTPLEVSRTSSTIEISFRQGYFSNAHGM 1138
            ..:|:...|.| |:|       :|.|:.      |.::...::.:..   ||:  ||..:..|.:
 Worm   225 NEEAQLLTGDG-EQE-------MAVPLDDLEERGEQAILKKDIEQVG---EIN--QGLDNTEHKI 276

  Fly  1139 V--RSYTIIIAEDVG--------KNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSS 1193
            |  |...::...|..        ||...| ||..:.:| .|:.:|....  ::.|...||  :.|
 Worm   277 VKGRKDQVVTRVDANRVYLKVHLKNEDQL-MPLIEFLQ-NTIAIPNNLY--FDDFQFENG--QLS 335

  Fly  1194 LEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSS-----PITTERSDT 1253
            :....|.......|| :.....|...|....|..|...:..|.....:.|.     |:.:...|.
 Worm   336 MRISRFEGAKPKADK-RIDSVEGVASAVYKRRKDIARLSGADVRETGIGSGEDGSLPVESSERDW 399

  Fly  1254 VIV------AATVSAVLLVAMVLVVVYCQHRCQLIR-------------------------RASK 1287
            :::      |.||:|:.|||.|.:....:|....|:                         ||||
 Worm   400 LLMPVLFVCAFTVTALGLVAAVQIARSRRHYKDNIQQIAEQLDGKNSFAYQDLCRQRADGGRASK 464

  Fly  1288 LARMQD--ELAALP-----EGYITPNRPVHVKDF-SEHYRI---MSADSDFRFSEEFEELKHVGR 1341
            .:....  |..|:|     .|::..|   .:::: ||..:|   .:...|:| :||..:.|    
 Worm   465 SSSTSSWCEETAVPTIDISTGHVVLN---FLQEYLSEPTKIEAQWNGIKDYR-NEERTKTK---- 521

  Fly  1342 DQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSD------YINANYMPGHNSPRE--F 1398
              |..||:      :||  .|||:|.:      :.|.||..      |:||::: ..:.||:  :
 Worm   522 --AEKFAS------QNR--TILPFDDN------IVDIDGKTAENEDFYLNASFI-YDDDPRQAVY 569

  Fly  1399 IVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTH 1463
            |..|.|..|....||:..|:.....:|.|:...|..:||  .||| |..:..:|..::.|:.:  
 Worm   570 IAAQTPASSQIAAFWQTIWQHGVCLVVNLSTPEECKQEK--NYWP-DTGSEVHGAFEIHLVSE-- 629

  Fly  1464 YHDWSISEFMVS-------RNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPI 1521
             |.|| .:::|.       :|.::|.:..||:.:|.....|...:|::.|.|............:
 Worm   630 -HIWS-DDYLVRSFYLKNLQNSQTRTITQFHYLSWQKESTPTSAKSILEFRRKVNKSYRGRSSAV 692

  Fly  1522 IVHCSAGVGRSGTFIALD----RILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLL 1582
            :||...|.||:|.:.|:|    |:|:.|.:   :|:...|..:|.:|..||.|..|:..::.|  
 Worm   693 LVHSWDGSGRTGVYCAVDVLCARLLRGIRQ---IDVVATVEHLRDQRDGMVATGDQFKLVYGC-- 752

  Fly  1583 AVLEGKEHLL 1592
             |.:...|||
 Worm   753 -VAQEVNHLL 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996 21/104 (20%)
PTP_tm 1127..1247 CDD:465889 28/134 (21%)
R3-PTPc 1358..1579 CDD:350396 63/239 (26%)
ida-1NP_498245.2 R-PTP-N-N2 553..758 CDD:350394 57/218 (26%)
Blue background indicates that the domain is not in the aligned region.

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