DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and LOC100330629

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_073763831.1 Gene:LOC100330629 / 100330629 -ID:- Length:1944 Species:Danio rerio


Alignment Length:1761 Identity:426/1761 - (24%)
Similarity:649/1761 - (36%) Gaps:434/1761 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GFPEPNTT-------IPASDIG--KDIKFSRALPGTEYNFWLYYTNSTHREQLTW----TVNITT 149
            |.|:|:.:       :..|:.|  |.:: |.:..||.....|....|...:|..:    |.|..|
Zfish   160 GNPDPDISWFKDFLPVNTSNNGRIKQLR-SESFGGTPIRGALQIEQSEESDQGKYECVATNNDGT 223

  Fly   150 APDPPANLSV-QLRSSKSAFITWRPPGSGRYS----------GFRIRV---------------LG 188
            ....||||.| :||..:..     ||   |:|          |..:.:               ||
Zfish   224 RYSAPANLYVRELREVRRV-----PP---RFSIPPTDNEIMPGGSVNITCVAVGSPMPYVKWMLG 280

  Fly   189 LTDLPFERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQGKESVAYTSRNFTTK--PNTPGKFI 251
            ..||..|....: |...|:|:  ::....:|...|.|.....|:||    ..|.|  |..||...
Zfish   281 SEDLTPEDDMPI-GRNVLELT--DVRQSANYTCVAMSTLGVIEAVA----QITVKALPKPPGVPQ 338

  Fly   252 VWFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLYVEREGEPPGPAQAAFK--GLVPGRE 314
            |..|..|::.:.|....|..: ::|.:...|.::..|...::      |.|...:.  ||.|..:
Zfish   339 VTERTATSITLTWDSGNPEPV-SYYIIQHKPKNSEDSFKEID------GVATTRYSVGGLSPYSD 396

  Fly   315 YNISVQTV--------SED----ETSSVPTTARYLTVPERVLNVTFDEAYTTSSSFRVRW-EPPR 366
            |...|..|        |||    .....|:||. ..|..|:|:.|         :..:.| ||..
Zfish   397 YQFRVVAVNNIGRGPPSEDIEAKTAEQAPSTAP-RQVRGRMLSAT---------TAIIHWDEPEE 451

  Fly   367 TYSEFDAYQVMLST--SRRIFNVPRAANGDSVYFDYPDILEPGRTYEVVVKTIA-DNVNSWPASG 428
            ...:...|:|..:|  |:.:....:.....|.:...|. |.|.:||  .:|.:| .:|...|.|.
Zfish   452 ANGQITGYRVYYTTDPSQHVNQWEKQIVRTSNFLTIPG-LTPNKTY--YIKVLAFTSVGDGPLSS 513

  Fly   429 EV-----TLRPRPVRSLGGFLDDRSNALHISWE-PAETGRQD---SYRISYHEQTNASEVPAPFP 484
            ::     |..|.......|.....::.| :||. |.:||:.:   .|.:.|.:..:..|....|.
Zfish   514 DLQIIAKTGVPSQPTDFKGEAKSETSIL-LSWNPPTQTGQDNQIIGYELLYKKGDDKEEKRVSFE 577

  Fly   485 VAAESQITTNLTEYTLDSLLAGRRYLIAVQALSK-GVASNASDI---TRYTRPAAPLIQELRSID 545
            ..         |.|.|..|.....|:..:.|.|| |:.:..::|   |..|:|:|| .||::...
Zfish   578 PT---------TTYLLKELKPFTTYMFQLAARSKHGIGAYTNEISAETPQTQPSAP-PQEVKCTS 632

  Fly   546 Q---GLMLSWRSD----VNSRQDRYEVHYQRNGTREERTMATNETSL---TIHY----LHPGSGY 596
            .   .:::||:..    .|....:|.:.|.  .|..:.|.....:.:   ..||    |...:.|
Zfish   633 HSSTSILVSWKPPPVELQNGIMTKYTIQYA--ATEGDDTSMRQVSDIPPEKYHYLLENLEKWTEY 695

  Fly   597 EVKVHAISHGVRSE-PHSYFQAVFPK------PPQNLTLQTVHTNLVVLHWQAP----EGSDFSE 650
            .|.|:|  |....| |.|..|.:..:      ||:.:.::.|::..|.:.|::|    :......
Zfish   696 RVTVNA--HTEAGEGPESLPQLIRTEEDVPSGPPRKVEVEAVNSTSVKVLWRSPVPSRQHGQIRG 758

  Fly   651 YVVRY-----------------RTDASPWQRISGLHENEARIKDMHYGERYLVQV---NTVSFGV 695
            |.|.|                 ..|.:.|: .....|:|..:.|:|....|.|.|   .|...|.
Zfish   759 YQVHYVRMVNGEPVGHPVIKDILMDDAQWE-YDDSAEHELVLSDLHAETTYSVTVAAYTTKGDGA 822

  Fly   696 ES-PHPLELNVTMPPQPVSNVVPLVDSRNLTLEW-PRPD--GHVDFYTLKWWPTDEEDRVEFKNV 756
            .| |..:.....:|.:|...|.| .:.....|:| |.|:  |.:..|.|::...|.|.      :
Zfish   823 RSKPKLVTTTGAVPEKPRLMVSP-TNMGTALLQWHPPPNTFGPLQGYRLRFGRKDVEP------L 880

  Fly   757 TQLEDLSSPSVRIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQ 821
            |.:| .|........:::..|..|.|.:.| .|.:..|                           
Zfish   881 TVIE-FSERENHYTTKEIHKGASYTFRLSA-RNKVGFG--------------------------- 916

  Fly   822 DETITLSYTP--TPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVS 884
            :||:....||  |||            |.|                                  .
Zfish   917 EETVKEISTPEDTPA------------GYP----------------------------------Q 935

  Fly   885 GGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADE-EAPQLLQNV 948
            |.||.             .|....|||:.:.:.|  ....|....:.|||...:. .:|..|...
Zfish   936 GIVAE-------------SSTTTTIQVSWQPVAL--AERNGAVVKYALQYKDINSPRSPSELFIT 985

  Fly   949 TKNTEITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTL-MRSSAPISASYQTLTAPPGKVDY 1012
            ...:.:||.||:....|                 |:.:... .:...|.|.|.|..|.|..:..:
Zfish   986 APESTVTLDGLKADTTY-----------------DIKMCAFTSKGPGPYSPSVQFRTQPVNQAVF 1033

  Fly  1013 ---FQPSDVQPGEVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDGLVPG 1074
               |.........|...|  |..|.:.|...|.|...|.      .|.|.....||..|..|.|.
Zfish  1034 AKNFHVRAAMKTSVLLTW--EIPENYNPAQPFTILYDNG------QSVEVDGKLTQKLIVNLQPE 1090

  Fly  1075 NHYIFRI--QAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNAHG 1137
            ..|.|.:  :..||   |..:..:.||  .||.:..  ..|..:|:|              ||.|
Zfish  1091 TQYSFLLTNRGNSA---GGLQHRVSTM--TAPDILR--TKPFLISKT--------------NADG 1134

  Fly  1138 M-------------VRSYTIIIAEDVGKNASGLEMPSWQ------------DVQAYTVWLPYQAI 1177
            |             ||:|.|::. .:.|...|..:..|:            ::...:|.|.::..
Zfish  1135 MVTVELPGVQTAERVRAYYIVVV-PLKKQRPGKFIKLWENPDEMNLEELLREINRTSVSLRFRRH 1198

  Fly  1178 EPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRA------------ 1230
            ....|::.:......:    .||:|.|   |....:.|..|..|..|...:.|            
Zfish  1199 LELKPYIAACFHELPN----EFTLGDA---KMYGEFQNKQLLNGQEYVFFVLAVLEISDSMLYAA 1256

  Fly  1231 --FTDEDKFTDTVYSSPITTERSDTVIVAATVSAVLLVAMVLVVVYCQHRCQLIRRASKLARMQD 1293
              ::|...|.| :...||..|....:.|...|.||:.:..:::.:......|..|   |.|..:.
Zfish  1257 SPYSDPVVFAD-IDPQPIIDEEEGLIWVVGPVLAVIFIICIVIAILLYKSSQPDR---KRAESEA 1317

  Fly  1294 ELAALPEGYITPNR------------------------------------PVHVKDFSEHYRIMS 1322
            ...:||.|...|:.                                    |:.|.:.::|...:.
Zfish  1318 RKGSLPSGKEMPSHHPTDPVELRRLNFQTPGSATSVYPSNLHLSRMASHPPIPVMELADHIERLK 1382

  Fly  1323 ADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINAN 1387
            |:.:.:||:|:|.: ..|:......:||..|:||||:.|::.|||||..|..:|...||||||:|
Zfish  1383 ANDNLKFSQEYESI-DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIDGIPGSDYINSN 1446

  Fly  1388 YMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYG 1452
            |:.|:.....:|.|||.|..|..:||||.||..|..|||:||..|:.|.||||||| :|....||
Zfish  1447 YIDGYRKQNAYIATQGALPETFGDFWRMIWEQRSANIVMMTRLEERSRVKCDQYWP-NRGTETYG 1510

  Fly  1453 DIKVQLIIDTHYHDWSISEFMVSRN--CESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIG 1515
            .|:|.|:.......:.:..|.:.:|  .|.|.:|.|.||.|||.||||.|...:.|:|..:....
Zfish  1511 LIQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKSCNP 1575

  Fly  1516 TDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQC 1580
            .|..|::|||||||||:|.||.:|.:|:.|.....|||:|.|..||.:|.:|||||.|||.||..
Zfish  1576 PDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYVFIHDS 1640

  Fly  1581 LL-AVLEGKEHLLADSLELH------ANDGYEVTKIYLE--RQPQTKMGTLPIRASLAMAEKLDA 1636
            |. ||..|...:.|.:|..:      ...|..||.:.||  |...||..|         :..:.|
Zfish  1641 LQEAVNCGTTEVPARNLYAYIQKLTQIESGENVTGMELEFKRLANTKAHT---------SRFISA 1696

  Fly  1637 DLMTNK 1642
            :|..||
Zfish  1697 NLPCNK 1702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628 66/290 (23%)
fn3 247..328 CDD:394996 21/94 (22%)
FN3 319..>749 CDD:442628 113/507 (22%)
fn3 708..796 CDD:394996 22/90 (24%)
fn3 902..978 CDD:394996 16/76 (21%)
fn3 1013..1092 CDD:394996 21/80 (26%)
PTP_tm 1127..1247 CDD:465889 28/158 (18%)
R3-PTPc 1358..1579 CDD:350396 103/222 (46%)
LOC100330629XP_073763831.1 None

Return to query results.
Submit another query.