DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and tnr

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001107287.1 Gene:tnr / 100135076 XenbaseID:XB-GENE-948286 Length:1350 Species:Xenopus tropicalis


Alignment Length:864 Identity:193/864 - (22%)
Similarity:336/864 - (38%) Gaps:140/864 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 LEPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDRSNALHISWEPAETGRQDSYRI 468
            ||||.||.:.|.::..::.|.|||..::......|.| .|::....::.:.|:| .....|.:.|
 Frog   382 LEPGVTYNISVCSVISDIISEPASITISTHISSPRGL-NFMEVTQTSVEVHWDP-PVFPLDGWEI 444

  Fly   469 SYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAVQAL---SKGVASNASDITRY 530
            |:..:.|...:..        |:.:::|.:....|..|..|.:::.:|   ::..|::.|..|..
 Frog   445 SFTPKNNEGGLTV--------QLPSSVTSFNQTGLKPGEEYTVSIISLKDQARSPATSGSISTDI 501

  Fly   531 TRPAAPLIQELRSIDQGLMLSWRSDVNSRQDRYEVHY-QRNGTREERTMATNE--TSLTIHYLHP 592
            ..|...|::::  .|....:.| :...::.|..::.| ..||..|:.|.....  :..::..|.|
 Frog   502 DGPTNILVRDV--TDTVAFVEW-TPARAKLDFMQLDYGPINGEGEKTTFRLQPPLSQYSMQVLRP 563

  Fly   593 GSGYEVKVHAISHGVRSEPHSYFQAVFP---KPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVR 654
            ||.||:.:..:.....|||   .:|.|.   ..|:||.:.:..::.:.|.|...| ::...|.|.
 Frog   564 GSQYEISIRGVRGDTESEP---VRATFTTELDAPKNLRVISHASSTLELEWDNSE-AEGEGYRVV 624

  Fly   655 YRTDASPWQRISGLHE----------NEARIKDMHYGERYLVQVNTVSFGVESPHPLELNV-TMP 708
            |.|.|.     ...||          .:|.:.|:..|..|.:.::.:.:.::|. |..:|. |..
 Frog   625 YSTLAG-----DQYHELIVPRNYGQTTKATLTDLIPGTEYGIGISAIRYNLKSA-PATMNARTEL 683

  Fly   709 PQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSPSVRIPIED 773
            ..|...:|.....::::|.|.:..|.:|.|.:.:.|:..    ....||...|:|    :..:.:
 Frog   684 DSPTDLMVTGSTDKSISLTWTKARGPIDHYRISFTPSSG----MASEVTVPSDIS----QYELSE 740

  Fly   774 LSPGRQYRFEVQASSNGIRSGTTHLSTRT--MPLIQSDVFIANAGHEQGQDETITLSYT-PTPAD 835
            |.||.:|...:.|.....:|..|.:...|  .|:.|.......|       .::.:|:| |:|..
 Frog   741 LEPGTEYTISIFAERGRQQSKETTIDAFTGFRPITQLHFSAVTA-------YSVNVSWTDPSPPP 798

  Fly   836 STRFDIYRFSMGDPTIKDKEKLANDTE-RKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLH 899
                |.:..:......||..:|..|.. |:...|.|.|...|.||:..|.|.|.:..|:......
 Frog   799 ----DQFILTYNPIDSKDPLQLFLDPSLRQTRLSALQPSTEYMVTLLPVHGTVRAELVEGTVTTG 859

  Fly   900 PLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHN 964
            ..|..||..|.|....:.:.|..|......:.|.|.|.......::.. ...|..||..|.|  |
 Frog   860 VAPPMDLSVINVTENSLAVVWRPPPSSLHHYRLTYQSTKGRMDSVVIG-NDQTRYTLANLMP--N 921

  Fly   965 YTFTVVVRSGSIQGTDFAD-VSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWS 1028
            ..:.:.:|  |::|.:.:: |.:           .|:..:..|.|    .:.|::...|....|.
 Frog   922 TEYKISLR--SVRGREESERVGI-----------VSWTAVDPPYG----LRTSNITATEALLHWE 969

  Fly  1029 LEPAEQHGPIDYFRITCQNADDA----ADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSALGY 1089
            ...:|..   .|..|...:|...    .|..|.||       ::..|:|..:|...:.|.  .|:
 Frog   970 PPRSEVE---SYVIIVTHHAGSGETILVDGESIEF-------QLQNLLPRTNYSVTLSAN--FGH 1022

  Fly  1090 GAERE-HIQTMPILAPPVPEPSVTPLEVSRTSSTIE----ISFRQGY---FSNAHGMVRSYTIII 1146
            ...|. .:....||.||:   ::|..||:|||:.|.    ||..:.|   :.:|:.. |...|:.
 Frog  1023 QTSRSVGVSFTTILDPPM---NLTATEVARTSALISWQPPISPIENYILTYKSANES-RKELIVD 1083

  Fly  1147 AEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIG------TAN 1205
            |||......||     .:...|||.:          ....||.| ||:....||.|      ..:
 Frog  1084 AEDTWIRLEGL-----LESTEYTVSI----------LSVQNGER-SSVTHTVFTTGGRVFSYPQD 1132

  Fly  1206 CDKHQAGYCNGPLRAGTTY 1224
            |.:|.   .||..::|..|
 Frog  1133 CAQHM---LNGDNQSGVYY 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628 79/364 (22%)
fn3 708..796 CDD:394996 18/87 (21%)
fn3 902..978 CDD:394996 18/75 (24%)
fn3 1013..1092 CDD:394996 16/82 (20%)
PTP_tm 1127..1247 CDD:465889 26/107 (24%)
R3-PTPc 1358..1579 CDD:350396
tnrNP_001107287.1 EGF_alliinase 153..196 CDD:398501
C_rich_MXAN6577 179..305 CDD:469225
EGF_Tenascin 197..224 CDD:480934
FN3 321..410 CDD:238020 11/27 (41%)
fn3 413..493 CDD:394996 15/89 (17%)
fn3 504..582 CDD:394996 17/80 (21%)
FN3 <563..>753 CDD:442628 47/207 (23%)
fn3 773..845 CDD:394996 20/82 (24%)
fn3 862..939 CDD:394996 19/81 (23%)
fn3 949..1018 CDD:394996 16/82 (20%)
FN3 1037..1122 CDD:238020 29/104 (28%)
FReD 1129..1337 CDD:238040 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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