DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and ooc-5

DIOPT Version :10

Sequence 1:NP_572178.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_495916.1 Gene:ooc-5 / 174433 WormBaseID:WBGene00003870 Length:356 Species:Caenorhabditis elegans


Alignment Length:306 Identity:111/306 - (36%)
Similarity:177/306 - (57%) Gaps:4/306 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GAVGAVALGAYF--KEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPALKAHIA 93
            |...|::.||::  |:...|...|||.:.::......|:..:...|.|||:|:..:|.::|:|..
 Worm    32 GTTIAISAGAFWGLKDRLKCYLYECCHEPDVNFNYHTLDADIANLLFGQHLVKDVVVNSIKSHWY 96

  Fly    94 SGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRVKIN 158
            :.| .|||||:||||..|:|||:|||.||:..:..|.||.:|...:...|||.::::..|:|::.
 Worm    97 NEN-PRKPLVLSFHGYTGSGKNYVAEIIANNTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELR 160

  Fly   159 NAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASH 223
            |.:..|::.|.||:|||||.||:|..:...:...:||.:.:.|.|..::|||.|||..|..||..
 Worm   161 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEIARI 225

  Fly   224 LGSVMKNGRLREDTRLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEA 288
            .....::|..||..||..||..|...:||..||::.:.:|.:|:||||:||||:::.||..|:.|
 Worm   226 TKEQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLIDHFVPFLPLQREHVRSCVGA 290

  Fly   289 ELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKK 334
             .||.|......:|...:|.::||...:..:...|:.||||.::.|
 Worm   291 -YLRKRGRGDLVSNVDFVERVLNSLQYFPESSKAFSSSGCKRVDAK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_572178.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..175 CDD:476819 43/119 (36%)
ooc-5NP_495916.1 Torsin 58..177 CDD:399367 43/119 (36%)

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