DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and dtx1

DIOPT Version :10

Sequence 1:NP_572178.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_002934314.1 Gene:dtx1 / 100127181 XenbaseID:XB-GENE-481116 Length:623 Species:Xenopus tropicalis


Alignment Length:190 Identity:39/190 - (20%)
Similarity:65/190 - (34%) Gaps:51/190 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 KSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAV 161
            ::.||::   |..|.:     .|.|.....:.|.......|:|.::..|:| .|..|..|:.:..
 Frog   354 RAPKPIL---HPPPVS-----KEDIKPVSGISGICRKTKKKHLKKSKNPEE-VVRRYIQKVKSPP 409

  Fly   162 RDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
            .:....|                 .::|.:...|    ||..:.:.|...|....|.  .:|:..
 Frog   410 DEDCTIC-----------------MERLVTASGY----DGVLSHRGIRGELVGKLGK--CNHMYH 451

  Fly   227 VM----------KNGRLREDTRLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLP 276
            |:          |:|.|:..|         .||.|....|.:....:|.|||.|.:|..|
 Frog   452 VLCLVAMYNNGNKDGSLQCPT---------CKAIYGEKTGTQPPGKMEFHVIPHSLPGYP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_572178.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..175 CDD:476819 15/77 (19%)
dtx1XP_002934314.1 WWE 25..101 CDD:128922
WWE 107..163 CDD:460715
RING-H2_DTX1_4 410..478 CDD:438333 16/99 (16%)
DTC 481..615 CDD:465650 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.

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