DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHOp24 and p24delta5

DIOPT Version :10

Sequence 1:NP_572165.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_173608.1 Gene:p24delta5 / 838792 AraportID:AT1G21900 Length:216 Species:Arabidopsis thaliana


Alignment Length:180 Identity:45/180 - (25%)
Similarity:83/180 - (46%) Gaps:8/180 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ECFFENVEGGTKFGVTFEVIDGGFLD----VDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYT 95
            :|..|.::........:.|:|....:    |..|::.|..:.:|..|..:.|::.|.....|.|.
plant    39 KCVSEEIQSNVVVLADYYVVDEHNPENTPAVSSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYL 103

  Fly    96 VCFNNERSSMTPKLVMFSID--VGDAPQRAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYM 158
            .||..:.|......:...:|  :|.|.:.......:|::...:|:  :|.|.|.:.|::....|:
plant   104 ACFWIDSSHHLANPITLGVDWKMGIAAKDWDSVAKKEKIEGVELQ--LRRLEGLVLSIRENLNYI 166

  Fly   159 HVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKRVV 208
            ..|:...|.|:|.|||||..:|.....|.|::...|:.||||:|..|:::
plant   167 KDREAEMREVSETTNSRVAWFSIMSLGVCVVVVGSQILYLKRYFHKKKLI 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_572165.1 EMP24_GP25L 24..203 CDD:426051 43/173 (25%)
p24delta5NP_173608.1 EMP24_GP25L 27..210 CDD:426051 43/172 (25%)

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