Protein Alignment CHOp24 and tmed1b

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001074109.2
• Gene: tmed1b / 791158
• ZFINID: ZDB-GENE-070112-1112
• Length: 226
• Species: Danio rerio
• Alignment Length: 218
• Identity: 63/218 - (28%)
• Similarity: 101/218 - (46%)
• Gaps: 15/218 - (6%)

  Fly     3 STLAKVLLLVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISG 67
            |.|..|.||.|::.........|...:.|.::|||:::........:.::||.|..:|||..:..
Zfish    10 SLLGYVTLLFGAVNAFSPADTEFTFLLPAASKECFYQSAVHNGSVEIEYQVIAGAGMDVDFSVVS 74

  Fly    68 PDN-HVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGE-- 129
            |.. |::.|. :.|.|.:......:|.|.:||:|..|..:.|:|.|.: :.|.|....||..|
Zfish    75 PQGIHLISEF-RRSDGVHMVEPTEEGDYQICFDNTFSRFSEKMVFFEV-ILDHPSNDAGADDEWA 137

  Fly   130 -----EEVGHTKLEDMIRELSGT----LTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEAL 185
                 |.:...||:| |:|...|    |...:..|.::...:...|::.|:...||..||....|
Zfish   138 GLGEPESILEYKLDD-IKESMETVHRRLERSRQMQTFLRAFEARDRNLLEDNLWRVSFWSCVNLL 201

  Fly   186 VLVLMTVGQVYYLKRFFEVKRVV 208
            ||:.:...|||.|:|.|:.||.|
Zfish   202 VLLSVAFIQVYTLRRLFDDKRRV 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	53/190 (28%)
tmed1b	NP_001074109.2	None