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Protein Alignment CHOp24 and Tmed10

DIOPT Version :10

Sequence 1:	NP_572165.1	Gene:	CHOp24 / 31382	FlyBaseID:	FBgn0029709	Length:	208	Species:	Drosophila melanogaster
Sequence 2:	NP_081051.1	Gene:	Tmed10 / 68581	MGIID:	1915831	Length:	219	Species:	Mus musculus

Alignment Length:	209	Identity:	55/209 - (26%)
Similarity:	99/209 - (47%)	Gaps:	20/209 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 LLLVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVID----GGFLDVDIKISGPD 69
            |||:|...:|..:.|     :..::.:|..|.:.........:|:.|    .|.|...:||:...
Mouse    21 LLLLGPSSVLGISFH-----LPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSA 80

  Fly    70 NHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTP-KLVMFSIDVGDAPQRAPGAPGEEEVG 133
            .|:::..|..:.||:.|.......:.|||.::.:...| :||:..:..|      ..|...||:.
Mouse    81 GHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG------VEAKNYEEIA 139

  Fly   134 HTK----LEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQ 194
            ..:    ||..:|.|.....|:.::..||..|::..|..||:||:||:.:|.|....|:.:...|
Mouse   140 KVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQ 204

  Fly   195 VYYLKRFFEVKRVV 208
            |:||:|||:.|:::
Mouse   205 VFYLRRFFKAKKLI 218

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.