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Protein Alignment CHOp24 and Tmed11

DIOPT Version :10

Sequence 1:	NP_572165.1	Gene:	CHOp24 / 31382	FlyBaseID:	FBgn0029709	Length:	208	Species:	Drosophila melanogaster
Sequence 2:	NP_080385.2	Gene:	Tmed11 / 67366	MGIID:	1914616	Length:	215	Species:	Mus musculus

Alignment Length:	214	Identity:	48/214 - (22%)
Similarity:	93/214 - (43%)	Gaps:	25/214 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 LILCRT---SHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGP--------- 68
            ::||.:   |.||........|:|..|::...|....||:|.....:..|...|.|
Mouse     6 ILLCFSFSFSAAFYFHAGEREEKCIIEDIPSDTLITGTFKVQQWDIVRHDFLESAPGLGMFVTVT 70

  Fly    69 --DNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMT----PKL-VMFSIDVGDAPQRAPGA 126
              ::.|:......:.|.:.|.:.:.|.:.:|..:..:...    .|| :...|.||:....|...
Mouse    71 TYNDEVLLSKLYGAQGTFYFTSHSSGEHIICLESNSTQFVSFGGSKLRIHLDIRVGEHDLDAAIV 135

  Fly   127 PGEEEVGHT--KLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVL 189
            ..:::|...  ||:.:|.::.    .:..||:|...|::..|..:|:||..|:.|:..:.|:.:.
Mouse   136 QAKDKVNEVTFKLQHLIEQVE----QILKEQDYQRDREENFRITSEDTNRNVLWWAFAQILIFIS 196

  Fly   190 MTVGQVYYLKRFFEVKRVV 208
            :.:.|:.:||.||..|::|
Mouse   197 VGIFQMKHLKDFFIAKKLV 215

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.