Protein Alignment CHOp24 and Tmed2

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001380734.1
• Gene: Tmed2 / 65165
• RGDID: 69243
• Length: 208
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 125/212 - (58%)
• Similarity: 163/212 - (76%)
• Gaps: 13/212 - (6%)

  Fly     4 TLAKVLLLVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGP 68
            |||::|:|:.:||   .|:..:.||:|||.||||||.|..|||.|:.|||.:|||||:|::|:||
  Rat     3 TLAELLVLLAALL---ATASGYFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGP 64

  Fly    69 DNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVG 133
            ||..:::.::||||||||.|...|||..||:|..|:||||:|||:||:|:||:   |...|.|.|
  Rat    65 DNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPK---GQDMETEGG 126

  Fly   134 -------HTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMT 191
                   ..|||:||.||:..:|:||||||||.||::|||::|:||||||||||.|||||||.||
  Rat   127 GDSWDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMT 191

  Fly   192 VGQVYYLKRFFEVKRVV 208
            :||:|||||||||:|||
  Rat   192 LGQIYYLKRFFEVRRVV 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	111/185 (60%)
Tmed2	NP_001380734.1	EMP24_GP25L	20..203	CDD:426051	111/185 (60%)