Protein Alignment CHOp24 and tmed1a

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001003487.1
• Gene: tmed1a / 445093
• ZFINID: ZDB-GENE-040801-229
• Length: 226
• Species: Danio rerio
• Alignment Length: 245
• Identity: 63/245 - (25%)
• Similarity: 99/245 - (40%)
• Gaps: 58/245 - (23%)

  Fly     1 MESTLAKVLLLVGSLLILC-----------RTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVI 54
            |:.|...|..|  |.|.||           .|...|::...|  .||||:.....:...|.::||
Zfish     1 MDETRLAVCFL--SFLTLCLDLGFTFGQNKDTEFTFLLPAGA--TECFFQTATKNSSMEVEYQVI 61

  Fly    55 DGGFLDVDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDA 119
            .|..|||...:..|..:.:....::|.|.:|..:..:|.|.:||:|..|.::.|:|...: :.|.
Zfish    62 AGSGLDVGFTLISPRGYRLVSDFRKSDGIHTVDSTEEGDYRICFDNSFSRISEKMVYVEV-IMDG 125

  Fly   120 PQRAPGAPGEEEVGHT-------------KLEDM-------------IRELSGTLTSVKHEQEYM 158
            |:      ||:|....             ||||:             .|:|..||.:.:....|:
Zfish   126 PE------GEDEDDEDWAALAEPEDSLEYKLEDIRDSMDAVHKSLERSRQLQTTLRAFEARDRYL 184

  Fly   159 HVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKRVV 208
             :.|.:.         ||..||....||::.:.:.|||.|:|.|..|..|
Zfish   185 -LEDNLW---------RVSFWSCASLLVMISVALTQVYTLRRLFNDKHKV 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	51/204 (25%)
tmed1a	NP_001003487.1	EMP24_GP25L	31..219	CDD:426051	51/206 (25%)