Protein Alignment CHOp24 and tmed3

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001122140.1
• Gene: tmed3 / 336391
• ZFINID: ZDB-GENE-030131-8335
• Length: 206
• Species: Danio rerio
• Alignment Length: 202
• Identity: 59/202 - (29%)
• Similarity: 98/202 - (48%)
• Gaps: 15/202 - (7%)

  Fly    14 SLLILCRTSHAFIVSVDA---------HNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPD 69
            |.|:|.    .:|..|:|         :.::||:|.:|.|.||.:.|:||.||..|||..::.|.
Zfish     4 SFLLLA----VYIAFVNATELTFELPDNEKQCFYEELEQGVKFDIDFQVIAGGNYDVDCFVTDPI 64

  Fly    70 NHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVGH 134
            |:::::..|:....::.....||.|.|||:||.|:.:.|.|......|:..:..|..  ......
Zfish    65 NNMLYQERKKQYDSFSHTTVMKGVYKVCFSNEFSTFSHKTVYLDFRSGEDDRLFPDQ--NRATAL 127

  Fly   135 TKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLK 199
            |::|.....:...|..|...|.:..:|:...|...|:.:.||..||..|.::|.::.:|||..||
Zfish   128 TQMESACLSIHEILKVVSDSQTWYRLREAQDRLRAEDLHERVHFWSIGETVILFVVCIGQVLMLK 192

  Fly   200 RFFEVKR 206
            .||..|:
Zfish   193 SFFNEKK 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	54/187 (29%)
tmed3	NP_001122140.1	EMP24_GP25L	19..196	CDD:426051	51/178 (29%)