Protein Alignment CHOp24 and tmed2

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_021334783.1
• Gene: tmed2 / 321550
• ZFINID: ZDB-GENE-030131-269
• Length: 208
• Species: Danio rerio
• Alignment Length: 212
• Identity: 119/212 - (56%)
• Similarity: 158/212 - (74%)
• Gaps: 13/212 - (6%)

  Fly     4 TLAKVLLLVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGP 68
            |.:::::|   |..|..|:..:.||:|||.||||:|.|..|||..:.|||.:|||||:|:||:||
Zfish     3 TFSELIVL---LCALSYTASGYFVSIDAHAEECFYERVNSGTKMSLMFEVAEGGFLDIDVKITGP 64

  Fly    69 DNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVG 133
            |...:::.::||||||:..|...|||..||:||.|:||||:|||:||:|:||:   |...|.|.|
Zfish    65 DGKQIYKGDRESSGKYSVAAHMDGTYKFCFSNEMSTMTPKIVMFTIDIGEAPK---GQDMETEGG 126

  Fly   134 -------HTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMT 191
                   ..|||:||.||:..:|:||||||||.||::|||::|:||||||||||.|||||||.||
Zfish   127 GDSWDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMT 191

  Fly   192 VGQVYYLKRFFEVKRVV 208
            :||:|||||||||:|||
Zfish   192 LGQIYYLKRFFEVRRVV 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	108/185 (58%)
tmed2	XP_021334783.1	EMP24_GP25L	20..203	CDD:426051	108/185 (58%)