Protein Alignment CHOp24 and Tmed1

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_006242706.1
• Gene: Tmed1 / 315461
• RGDID: 1311679
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 50/167 - (29%)
• Similarity: 78/167 - (46%)
• Gaps: 16/167 - (9%)

  Fly    51 FEVIDGGFLDVDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSID 115
            |.||.|..||||..:..|...::....:::.|.:|......|.|.:||:|..|:::.|||.|.:
  Rat    95 FVVIGGAGLDVDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYRLCFDNSFSTISEKLVFFEL- 158

  Fly   116 VGDAPQRAPGAPG------EEEVGHTKLEDMIRELSGTLTSVKHEQEYM------HVRDKIHRSV 168
            :.|:.|......|      .||:...|:||:...:....|.::...:.:      ..||   |::
  Rat   159 IFDSFQDEEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARD---RNL 220

  Fly   169 NENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVK 205
            .|:...||..||.....||:|:.|.||..|||||..|
  Rat   221 QEDNLERVNFWSAANVAVLLLVAVLQVCTLKRFFHDK 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	48/163 (29%)
Tmed1	XP_006242706.1	EMP24_GP25L	33..254	CDD:426051	47/162 (29%)