DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cmtr1 and cmtr1

DIOPT Version :10

Sequence 1:NP_572148.2 Gene:Cmtr1 / 31355 FlyBaseID:FBgn0029693 Length:788 Species:Drosophila melanogaster
Sequence 2:NP_956427.1 Gene:cmtr1 / 393102 ZFINID:ZDB-GENE-040426-696 Length:829 Species:Danio rerio


Alignment Length:805 Identity:322/805 - (40%)
Similarity:468/805 - (58%) Gaps:65/805 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSDDENS-------EPTPKKIKREWVKSYSNKAMEMMKKMGYENDKGLGKSNQGRLEPIIAVQQD 61
            |||.:||       |.:.|      ...|:|.:.::|.|||:...:||||..|||.|.:.|..|.
Zfish    57 PSDSQNSQGSMAHNEASNK------FAMYNNVSQKLMAKMGFREGEGLGKYGQGRKEIVEASTQR 115

  Fly    62 GRRGFGLKLDTVQSSAG-QWDPACEELEIPEPVLWLHNPGSRADAYSLDQLMGHLVTGEKKLTLD 125
            ||||.||.|...|.... .|:...|...| |.|.|.  |.|..:....|:|...:..|||||.:|
Zfish   116 GRRGLGLMLKGFQGDLNVDWEDEPEPSAI-EQVSWF--PESSPEIPDSDELRDWMTIGEKKLKID 177

  Fly   126 GETRYCDPAILHHILNAKTVFDDLNDNEKRRARSRCNPFETIRSSIFLNRAAVKMANIDSMCNFM 190
            .|..:|...:||.:|..|||||||...|.||||:|.||:||||.:.||||||:||||:|.:.::|
Zfish   178 DEIEFCSENLLHLLLRCKTVFDDLEGEEMRRARTRSNPYETIRGAFFLNRAAMKMANMDHVFDYM 242

  Fly   191 FTNPRDPAGQTLV--APDELLYFTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFKLEKFFA 253
            ||||:|..|:.|.  ...|||||.|:||||||||||||:|:.|.|||||.||:||||||||.|:|
Zfish   243 FTNPKDSQGKVLTRDKEGELLYFGDVCAGPGGFSEYVLWRRRWHAKGFGMTLKGANDFKLEDFYA 307

  Fly   254 ASPESFDTFY---GVKEDGNIFDESNQDSLNEYIRMHTP-QGVHFAMADGGFSVEGQKNIQEILS 314
            |..|.|:.:|   |:..||:|....|..:...::...|. :|:||.|||||||||||:|:|||||
Zfish   308 APSELFEAYYGEGGIDGDGDITRPENISAFRNFVLDSTEGRGLHFLMADGGFSVEGQENLQEILS 372

  Fly   315 KQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLV 379
            |||.||||||||.::||.|.|:||.|||||||||||:||:|.||:::::.||.:|||||||||:|
Zfish   373 KQLLLCQFLTALSVVRPGGHFLCKTFDLFTPFSVGLIYLLYLCFERVSLFKPVTSRPANSERYVV 437

  Fly   380 CKYKRSDAETAGIVAYLNTVNLMLSDESQLDENDVLEIFNANELAEDEDFLRYIIDSNNAIGKKQ 444
            ||..:..  |..:..|:.|:||.| ::.:..:.||:|:...:.:..|.||.:|:|.||.:....|
Zfish   438 CKGLKPG--TDAVREYMFTINLKL-NQFRHSDRDVIEVVPLDIIKGDTDFFQYMIGSNESYCAVQ 499

  Fly   445 IVGLRKIAAFAQNLELKETKQSEVRQECLKRWGLPDKLRQAPE-NKPTDRLLDELLADWANERSW 508
            |..|.||.|:.::..|.|.:|:::|:||||.||:|||.|..|. :.|.::..:  |...:...|:
Zfish   500 IKALAKIHAYVRDTTLFEARQADIRKECLKLWGIPDKARVTPSTSDPKNKFYE--LVKGSEMDSF 562

  Fly   509 LSLPATEMKGVASLNAT----IKNVADWYFVPVGREETNINACSLFLCKSRGNLLRYT----EHK 565
            .|.|       .:||:.    :::|.|:..:..|.|:       |||. :.|....||    ...
Zfish   563 NSRP-------TALNSVNLEKLQHVLDYRCIVGGGEQ-------LFLL-ALGRSQIYTWDGKAPS 612

  Fly   566 KWELVETAFEVQ-PRSIFFG-QIVYEFYGEGRTIQRMAALHIIDGICLGGVDIRRRPYRERVSMC 628
            :|:.:|. |::: ||..... :||.|..|||:..:|:.|:|::|.:.|.|.|:|.:.:.:|:.|.
Zfish   613 RWKKLEN-FKMELPRDTLLSVEIVQELKGEGKAQRRINAVHVLDALVLNGTDVRDQHFNQRIQMV 676

  Fly   629 DKFARSLNKPYRKDRTFGALRSKPLFRLQDMGSFFANMRHYVLKDNS--QRLGFALDDNKFFVPG 691
            :||.::::||.|.|  ...:|.|.::||::|...|..:...:.|.:.  .||.:...|::.|:|.
Zfish   677 EKFVKAVSKPSRPD--MNPIRVKEVYRLEEMEKIFVRLEMKITKSSGGMPRLSYTGRDDRHFLPT 739

  Fly   692 GIMMFCELTNNYVSAHSRSRGQLYYFNVRNKESYYKDQIPRNKADEIFASFRFSFSCRLLWKWTD 756
            |:.:...:.:.:..|.|:|..:.:::|.:.|||.|  .:|....    |.|......||.|.|.:
Zfish   740 GLYIIKTVNDPWTMAFSKSSKRKFFYNKQTKESTY--DLPATSV----APFYVCHQDRLFWAWEE 798

  Fly   757 LRQVEELATEDNPKILFRSDFVKFI 781
            ..:|.:..|..||..|.:.|.|.||
Zfish   799 GVRVHDSQTRINPDKLSKDDVVSFI 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cmtr1NP_572148.2 G-patch 25..69 CDD:396249 21/43 (49%)
FtsJ 172..383 CDD:426399 133/216 (62%)
cmtr1NP_956427.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 5/10 (50%)
Bipartite nuclear localization signal. /evidence=ECO:0000255|PROSITE-ProRule:PRU00768 2..16
G-patch 79..121 CDD:396249 20/41 (49%)
FtsJ 224..440 CDD:426399 132/215 (61%)
Adenylation_DNA_ligase_like 547..709 CDD:448381 48/181 (27%)
WW 746..778 CDD:197736 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.

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