DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cmtr1 and CMTR1

DIOPT Version :10

Sequence 1:NP_572148.2 Gene:Cmtr1 / 31355 FlyBaseID:FBgn0029693 Length:788 Species:Drosophila melanogaster
Sequence 2:NP_055865.1 Gene:CMTR1 / 23070 HGNCID:21077 Length:835 Species:Homo sapiens


Alignment Length:794 Identity:304/794 - (38%)
Similarity:450/794 - (56%) Gaps:87/794 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YSNKAMEMMKKMGYENDKGLGKSNQGRLEPIIAVQQDGRRGFGLKL------------DTVQSSA 77
            |::.:.::|.|||:...:||||.:|||.:.:.|..|.||||.||.|            |..:.||
Human    87 YNSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSA 151

  Fly    78 GQ---WDPACEELEIPEPVLWLHNPGSRADAYSLDQLMGHLVTGEKKLTLDGETRYCDPAILHHI 139
            .:   |.|.| ..|||:                ..::...:|.|::|:.::.||.:|...:||.:
Human   152 CEQVSWFPEC-TTEIPD----------------TQEMSDWMVVGKRKMIIEDETEFCGEELLHSV 199

  Fly   140 LNAKTVFDDLNDNEKRRARSRCNPFETIRSSIFLNRAAVKMANIDSMCNFMFTNPRDPAGQTLV- 203
            |..|:|||.|:..|.||||:|.||:|.||...||||||:||||:|.:.:.|||||||..|:.|| 
Human   200 LQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVK 264

  Fly   204 -APDELLYFTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFKLEKFFAASPESFDTFY---G 264
             ...|||||.|:||||||||||||:||.|.|||||.||:|.||||||.|::||.|.|:.:|   |
Human   265 DREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGG 329

  Fly   265 VKEDGNIFDESNQDSLNEYIRMHTP-QGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKI 328
            :..||:|....|..:...::..:|. :||||.|||||||||||:|:||||||||.|||||.||.|
Human   330 IDGDGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSI 394

  Fly   329 LRPNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVCKYKRSDAETAGIV 393
            :|..|.|:||.||||||||||||||:|.||:::.:.||.:|||||||||:|||..:...:  .:.
Human   395 VRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGID--DVR 457

  Fly   394 AYLNTVNLMLSDESQLDENDVLEIFNANELAEDEDFLRYIIDSNNAIGKKQIVGLRKIAAFAQNL 458
            .||..||:.|:.....| :||..:.....:..|.:|..|:|.||.:....||..|.||.||.|:.
Human   458 DYLFAVNIKLNQLRNTD-SDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQIKALAKIHAFVQDT 521

  Fly   459 ELKETKQSEVRQECLKRWGLPDKLRQAPENKPTDRLLDELLADWANERSWLSLPATEMKGVASLN 523
            .|.|.:|:|:|:|||:.||:||:.|.||.:........||            :..||: .:.|..
Human   522 TLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFEL------------IQGTEI-DIFSYK 573

  Fly   524 AT---------IKNVADWYFVPVGREETNINACSLFLCKSRGNLLRYT----EHKKWELVETAFE 575
            .|         |:.|.|:..:..|.|:.       ||. ..|....||    :..:|..::...|
Human   574 PTLLTSKTLEKIRPVFDYRCMVSGSEQK-------FLI-GLGKSQIYTWDGRQSDRWIKLDLKTE 630

  Fly   576 VQPRSIFFGQIVYEFYGEGRTIQRMAALHIIDGICLGGVDIRRRPYRERVSMCDKFARSLNKPYR 640
            :...::...:||:|..|||:..::::|:||:|.:.|.|.|:|.:.:.:|:.:.:||.::::||.|
Human   631 LPRDTLLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKPSR 695

  Fly   641 KDRTFGALRSKPLFRLQDMGSFFANMRHYVLKDNS--QRLGFALDDNKFFVPGGIMMFCELTNNY 703
            .|  ...:|.|.::||::|...|..:...::|.:|  .:|.:...|::.|||.|:.:...:...:
Human   696 PD--MNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVRTVNEPW 758

  Fly   704 VSAHSRSRGQLYYFNVRNKESYYKDQIPRNKADEIFASFRFSFSCRLLWKWTD-LRQVEELATED 767
            ....|:|..:.:::|.:.|:|.:  .:|   ||.| |.|...:..||.|:|.| :|..:....:|
Human   759 TMGFSKSFKKKFFYNKKTKDSTF--DLP---ADSI-APFHICYYGRLFWEWGDGIRVHDSQKPQD 817

  Fly   768 NPKILFRSDFVKFI 781
            ..| |.:.|.:.||
Human   818 QDK-LSKEDVLSFI 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cmtr1NP_572148.2 G-patch 25..69 CDD:396249 19/43 (44%)
FtsJ 172..383 CDD:426399 136/216 (63%)
CMTR1NP_055865.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67
Bipartite nuclear localization signal. /evidence=ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000305|PubMed:24402442 2..19
G-patch 87..129 CDD:396249 18/41 (44%)
FtsJ 232..448 CDD:426399 135/215 (63%)
Adenylation_DNA_ligase_like <625..716 CDD:448381 27/92 (29%)
Interaction with POLR2A. /evidence=ECO:0000269|PubMed:18533109 727..835 30/111 (27%)
Blue background indicates that the domain is not in the aligned region.

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