DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and PTR2

DIOPT Version :10

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_178313.1 Gene:PTR2 / 814735 AraportID:AT2G02040 Length:585 Species:Arabidopsis thaliana


Alignment Length:755 Identity:163/755 - (21%)
Similarity:268/755 - (35%) Gaps:276/755 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 QNGKELAETN--DFKN---VSETEGQQKKLPYPKSVFFIISNEFCERFNYYGMRTVLVLYLSRVL 162
            |..|..||..  ||..   :.|..|..|..|      ||:.||.|||..|||:...|:.||:..|
plant    19 QEVKLYAEDGSVDFNGNPPLKEKTGNWKACP------FILGNECCERLAYYGIAGNLITYLTTKL 77

  Fly   163 GYSDDTATVVFHIFTMFVYFLCVFGAIISDSWLGKFKTILYLSLVYICGSVLLTLGAIGPLNLPM 227
            ...:.:|......:....|...:.||:::|::.|::.||...|.:|..|...|||.|..|...|.
plant    78 HQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPA 142

  Fly   228 E------------TFTML--GLALIALGSGGIKPCVSAFGGDQFKVPEQVKQI--TSFFSLFYFS 276
            |            .:.|.  ||.|||||:||||||||:||.|||...:..:::  .|||:.||||
plant   143 ECIGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFS 207

  Fly   277 INAGSLISTTVTPILREDVSCFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVL 341
            ||.|:|:|:::...::|:       ..:.|.||:|.|.|.:::..|..|..||:.:.|.|:.:..
plant   208 INIGALVSSSLLVWIQEN-------RGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITR 265

  Fly   342 VSSTIWTAL---TTKCKEKKT---------------NPREHWLD--YADK------------KYD 374
            :|..:..:.   :.|..|..|               ...||..|  |.||            .|.
plant   266 ISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEESKSGDYS 330

  Fly   375 RQ-------LIDDVKVLMRVLFLYLPLPVFWALFDQQGSRWTFQATRMDGDMGSWDIKPDQLQVL 432
            ..       .::::|:|:|:..::....:|.|::.|..:.:..|...|:..:||:.:.|..|...
plant   331 NSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTF 395

  Fly   433 NPLLILIFIPLYDVALYP-ALKLVGIRR---PLQKLTMGGILAGIAFIISGVVELSLEKTYPDLP 493
            :...::|::||||..:.| |.|..|:.:   .:|::.:|..::.:....:.:||:          
plant   396 DTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEI---------- 450

  Fly   494 YSQNIQLRIFNADNCDYFFTSNIPGAENVTVTSLNAYTNKDIYAPGSLDVEFSLSSASEACTISA 558
                |:|.:.|                                                      
plant   451 ----IRLHMAN------------------------------------------------------ 457

  Fly   559 DKIPKVLTDNTAWSLFLNPLNGSGYYWEEDFVDKPSQSHPLIRNVANVPQELSIRWEKASTGEVV 623
                                                                             
plant   458 ----------------------------------------------------------------- 457

  Fly   624 YDDLASKTLLTRVNSAEYVVMVGERNVGTFDVHTGGVYTLLIKDNNNIYEANLEEVTSPNSVKIL 688
                                                             :..|.|..:|..:.:|
plant   458 -------------------------------------------------DLGLVESGAPVPISVL 473

  Fly   689 WLVPQYVVMTLGEVMFSVTGLEFSYAQAPPSMKSVLQACWLLTVAFGNVIVVVIAEAALF----- 748
            |.:|||.::...||.:.:..|||.|.|:|.:|:|:..|..|||.|.||.:..:|.....:     
plant   474 WQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRN 538

  Fly   749 --ESQASE----------FFLFAGLMFADMLIFMVMAYYY 776
              |...|:          |:|.|||...:|.::...|..|
plant   539 GQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARY 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 rad23 <15..>83 CDD:273167
2A1704 145..776 CDD:273343 145/706 (21%)
PTR2NP_178313.1 MFS_NPF8 45..579 CDD:340976 155/729 (21%)
Blue background indicates that the domain is not in the aligned region.

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