DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14421 and CG11300

DIOPT Version :8

Sequence 1:NP_570042.1 Gene:CG14421 / 31285 FlyBaseID:FBgn0029644 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_611825.1 Gene:CG11300 / 37760 FlyBaseID:FBgn0034901 Length:157 Species:Drosophila melanogaster

Alignment Length:184 Identity:46/185 (25%)
Similarity:67/185 (36%) Gaps:63/185 (34%)


  Fly    32 DEPAAQGRLSATQLTDLLNSLKGSSSSTTAA--------PTTTTLPSTSTVTTSPTGPTTSTGTS 88
            |.|.|.|...|:      :...|:.:|...|        |.|.|.||.|....:||.||.:|||.
  Fly    21 DSPPAAGSPPAS------SPPAGTPTSPPPATGTPPSPSPATGTPPSASPAAGTPTSPTPATGTP 79

  Fly    89 TTTTTP----TTTSPTGTTTARQLEPLDDQEDDDEEEQQLGHHQRFQLEDQNDDEEEHTQVARSQ 149
            ::..||    ::|||...|:     |.|......:|                             
  Fly    80 SSPATPDAPASSTSPATPTS-----PSDSGSSSSQE----------------------------- 110

  Fly   150 ANRRRQVNARRQRQRLQQKYRRRQQQQRRRRQQQQQKRRQQQKR--RQQQRRRR 201
                 .:..||:.:||:::.||    :||:..|..|.....|.|  |:..|.||
  Fly   111 -----VIRLRRRLRRLRRQLRR----ERRQANQSNQNGGGGQGRVVRRVHRHRR 155

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG14421NP_570042.1 None
CG11300NP_611825.1 Pacs-1 <3..>75 CDD:287256 18/60 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR23246
RoundUp 00.000 Not matched by this tool.
11.100

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