DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Rnf138

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_038953128.1 Gene:Rnf138 / 94196 RGDID:621485 Length:245 Species:Rattus norvegicus


Alignment Length:154 Identity:38/154 - (24%)
Similarity:60/154 - (38%) Gaps:49/154 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGHCNVRCDGCGNNRMTFYR----YKCLHCLDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDAL- 84
            ||.|.     |.:.::.|||    ||  .|..|.     .|.|||:.:.::.      :.:|:: 
  Rat    83 SGSCR-----CCSKKIKFYRMRHHYK--SCKKYQ-----DEYGVSSVIPNVK------ISQDSVR 129

  Fly    85 ------------------ELHFAGEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVC 131
                              :...:|.|       :|.||:|.|..|:.:.|..||..||.......
  Rat   130 SSNRSETSASDNTETYQEDTSSSGHP-------TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPV 187

  Fly   132 ICPVCAAVPLSQPSHIA-HIANHL 154
            .||:|.::|...||.|. :..:||
  Rat   188 TCPICVSLPWGDPSQITRNFVSHL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 12/51 (24%)
zf-Di19 99..149 CDD:428539 18/50 (36%)
Rnf138XP_038953128.1 RING-HC_RNF138 14..66 CDD:438206
zf_C2HC_14 80..112 CDD:465807 11/40 (28%)
zf-Di19 155..215 CDD:428539 21/64 (33%)
Blue background indicates that the domain is not in the aligned region.

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