DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Rnf138rt1

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_083118.1 Gene:Rnf138rt1 / 74264 MGIID:1921514 Length:248 Species:Mus musculus


Alignment Length:150 Identity:37/150 - (24%)
Similarity:59/150 - (39%) Gaps:35/150 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HTSGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCK-ENGVSNGLHSL------------DHP 74
            |..|:|.     |.:.|:..||.:    ..|..|...: |.|||..:.|.            :.|
Mouse    82 HFPGNCR-----CCSQRVELYRMR----QHYKTCEKYQDEFGVSTSVSSFQQSPNSVGNSNNEAP 137

  Fly    75 LQC---LMDRDALELHFAGEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCI-CPV 135
            ...   ::..:........||       :|.||:|.|:..|.:.|..||..:|| .|.|.: ||:
Mouse   138 ASANAEVLQEEEENASPPDEP-------TFDCPLCEEVTMSRQRLLDHCNSSHR-GRVVSVTCPI 194

  Fly   136 CAAVPLSQPSHIA-HIANHL 154
            |.::|...|..:. :..:||
Mouse   195 CLSLPWGDPPQLTRNFVSHL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 12/63 (19%)
zf-Di19 99..149 CDD:428539 18/51 (35%)
Rnf138rt1NP_083118.1 RING-HC_RNF138 15..67 CDD:438206
zf_C2HC_14 81..113 CDD:465807 9/39 (23%)
zf-Di19 158..218 CDD:428539 20/64 (31%)
Blue background indicates that the domain is not in the aligned region.

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