DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Kcmf1

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001121664.1 Gene:Kcmf1 / 684322 RGDID:1591490 Length:381 Species:Rattus norvegicus


Alignment Length:199 Identity:69/199 - (34%)
Similarity:98/199 - (49%) Gaps:32/199 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFA 89
            |.|..|.||.|........|||||.|.|||||:.|.|:|.:...|:.|||:||::.|...:|::.
  Rat     2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYG 66

  Fly    90 GEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHI-----AH 149
            ||...:....|||||.||:||::...|:.|....|....|..|||:|||:|...|:|:     ||
  Rat    67 GEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAH 131

  Fly   150 I---------------ANHL--MFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSG-SGAQHT 196
            :               ..|:  ||.|. |..|.|        :|..|::...|:.:.| |.:|.:
  Rat   132 LTLEHRAPRDLDESSGVRHVRRMFHPG-RGLGGP--------RARRSNMHFTSSSTGGLSSSQSS 187

  Fly   197 FSSS 200
            :|.|
  Rat   188 YSPS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 23/47 (49%)
zf-Di19 99..149 CDD:428539 22/54 (41%)
Kcmf1NP_001121664.1 ZZ_PCMF_like 7..55 CDD:239078 23/47 (49%)
zf-Di19 76..137 CDD:428539 24/60 (40%)

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