DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Rnf138l1

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001101725.1 Gene:Rnf138l1 / 317486 RGDID:1565844 Length:247 Species:Rattus norvegicus


Alignment Length:147 Identity:31/147 - (21%)
Similarity:55/147 - (37%) Gaps:35/147 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCKEN-----------------GVSNGLHSLDH 73
            |:|.     |.:.|:..||.:    ..|..|...::.                 |.||...|...
  Rat    84 GNCR-----CCSQRVELYRMR----QHYKTCEKYQDEFGVATPASSFQLSPDSVGNSNNEASASE 139

  Fly    74 PLQCLMDRDALELHFAGEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAA 138
            ..:...:.:. .:....:|       :|.||:|.|:..:.:.|..||..:||......|||:|.:
  Rat   140 NAEAFQEEED-NVSPPDQP-------TFDCPLCEEVNMTRQRLLDHCNSSHRGHVVPVICPICLS 196

  Fly   139 VPLSQPSHIA-HIANHL 154
            :|...|:.:. :..:||
  Rat   197 LPWGDPTQLTRNFVSHL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 10/64 (16%)
zf-Di19 99..149 CDD:428539 16/50 (32%)
Rnf138l1NP_001101725.1 RING-HC_RNF138 14..66 CDD:438206
zf_C2HC_14 80..112 CDD:465807 8/36 (22%)
zf-Di19 157..217 CDD:428539 19/64 (30%)
Blue background indicates that the domain is not in the aligned region.

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