DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and SYP132

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001190256.1 Gene:SYP132 / 830702 AraportID:AT5G08080 Length:315 Species:Arabidopsis thaliana


Alignment Length:148 Identity:44/148 - (29%)
Similarity:76/148 - (51%) Gaps:6/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 QNYETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKER--QTLREMMDRFNE 248
            |.|...|.:  |::| :....|.|..|:.|||...::......:||..:.:  .||.|:.:|.:.
plant   163 QEYRDVVDR--RVYT-VTGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDA 224

  Fly   249 LRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARKKKI 313
            :|.|||.:.::..:|:.:..||..|.|::..:|.....|..||..|...|.:|:..||.:||...
plant   225 VRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMC 289

  Fly   314 MLIVILAAVLLVLLLVGI 331
            :.|:||..|:.| ::||:
plant   290 IAIIILLIVVAV-IVVGV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 36/127 (28%)
SNARE_syntaxin1-like 238..298 CDD:277201 18/59 (31%)
SYP132NP_001190256.1 Syntaxin 36..250 CDD:459942 24/89 (27%)
SNARE 218..284 CDD:473982 19/65 (29%)

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