DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and stx12l

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_697581.5 Gene:stx12l / 569124 ZFINID:ZDB-GENE-110715-1 Length:297 Species:Danio rerio


Alignment Length:310 Identity:68/310 - (21%)
Similarity:135/310 - (43%) Gaps:79/310 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SYSVVSQNSHSCSNNNSSTEPKDRSSSKMTQYGSNVDDILNPYTEIRQQLAQIAANLET---MNR 110
            ||.:: .:||      |.::|:|.::...| ..||:..|.....:|:..|.|:....:|   .:|
Zfish    32 SYGMM-DSSH------SQSQPRDFNNLTQT-CSSNIQKITQNTGQIKSMLFQLGTRPDTPELQDR 88

  Fly   111 MAQTVNLRTFNENEMDELHNKNLR-LGNQLMTRFNDFKANLPAENDYSLEARMKRTLFYGLHQTF 174
            :.|..:.    .|::.:..|::|: ||            .||.....| |.|.:|.         
Zfish    89 LQQVQHY----TNQLAKETNRHLKDLG------------TLPQPQSPS-EQRQQRI--------- 127

  Fly   175 INLWHKNELF------LQNYETKVKKNLRLHTKIINSEASEQEIELLIENKTTKLF-VDNFLQ-- 230
                .|:.|.      |.|::            ::...|:|:|.|.:...:....| ||...|  
Zfish   128 ----QKDRLMNDFSAALNNFQ------------VVQRRAAERERESVARARAGSRFQVDELNQDE 176

  Fly   231 -------------ETEKE---RQTLREMMDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQR 279
                         :||:|   .:.|..:.:|...:|:||..|.:|:.:|..:..::.:|.::|..
Zfish   177 QLVTFEKNEGWRMQTEEEPVTEEDLELIKERETNIRQLESDIMDVNQIFKDLAVMIHDQGDMIDS 241

  Fly   280 VEFHAQQATLHVDKGADELDQAEQHQKKARKKKIMLIVILAAVLLVLLLV 329
            :|.:.:.|.:||::||::|..|..:|:|:||:..:|.::|:.|..:..::
Zfish   242 IEANVESAEVHVERGAEQLQHAAYYQRKSRKRMCILALVLSLVATIFAII 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 34/144 (24%)
SNARE_syntaxin1-like 238..298 CDD:277201 16/59 (27%)
stx12lXP_697581.5 None

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