DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and stx11

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001008147.1 Gene:stx11 / 493509 XenbaseID:XB-GENE-952014 Length:285 Species:Xenopus tropicalis


Alignment Length:316 Identity:69/316 - (21%)
Similarity:129/316 - (40%) Gaps:58/316 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVS--QNSHSCSNNNS 65
            ||||.|||:.:            .|......|..|..:...|..:..:::.|  |:.......|.
 Frog     2 KDRLNELLEYA------------KLHTQYVQGEEEDELQGFGVFDTDHALESLYQDIQLIRTENH 54

  Fly    66 STEPKDRSSSKMTQYGSNVDDILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFNENEMDELHN 130
            ..:...:...|.|             |.....:.::::.....|.:|:.:..|.      :.:|.
 Frog    55 LMKVDVKRLGKQT-------------TRFLTSMRRLSSIKRDSNSIAKDIKTRA------EGIHK 100

  Fly   131 KNLRLGNQLMTRFNDFKANLPAEN---DYSLEARMKRTLFYGLHQTFINLWHKNELFLQNYETKV 192
            |...|.|          .:..|||   :.|:.||:.::.:..|...|      .|..|:..|.::
 Frog   101 KLQSLKN----------LSEDAENKSGESSVMARVSKSQYMTLTLEF------QEAMLEYNEAEM 149

  Fly   193 ------KKNLRLHTKIINSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRR 251
                  |..::...:|:..:.|..:|:.:||.....:|.:|.|.:.:..|..|.|:..|..||.:
 Frog   150 VQRENCKIRIQRQLEIMGKDVSGNQIDDMIEQGKWDVFSENLLSDVKVARSALNEIETRHKELLK 214

  Fly   252 LEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKK 307
            ||..|.|||.||:::..||.||:|.:..||.:.::...:|.:...::.||.::::|
 Frog   215 LESRIREVHDLFLQMAILVEEQAETLNVVELNMEKVKDYVGEAKTQVRQAVEYKRK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 35/127 (28%)
SNARE_syntaxin1-like 238..298 CDD:277201 21/59 (36%)
stx11NP_001008147.1 Syntaxin 41..236 CDD:459942 49/229 (21%)
SNARE 205..270 CDD:473982 21/64 (33%)

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