DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx4 and stx12

DIOPT Version :10

Sequence 1:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_009292403.1 Gene:stx12 / 415141 ZFINID:ZDB-GENE-040625-11 Length:267 Species:Danio rerio


Alignment Length:291 Identity:68/291 - (23%)
Similarity:138/291 - (47%) Gaps:46/291 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SCSNNNSSTEPKDRSSSKMTQYGSNVDDILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFNEN 123
            |....:....|||.||...| ..||:..|.....:|:..:.|:...|:| :.:.:.:.....:.|
Zfish     2 SYGRTDQRASPKDFSSLIQT-CSSNIQKITLNTAQIKGLVNQLGTKLDT-SGLRERLQYMQHHTN 64

  Fly   124 EMDELHNKNLR-LGNQLMTRFNDFKANLPAENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQN 187
            ::.:..||:|: ||:          .:||.......:.::::.          .|.:.....|.|
Zfish    65 QLAKETNKHLKDLGS----------ISLPVSLSEQRQQKIQKD----------RLMNDFSAALNN 109

  Fly   188 YET-------KVKKNL---RLHTKIINSEASEQEIELLIEN-----KTTKLFVDNFLQETEKERQ 237
            ::.       |.|:::   |..:::...:....|..:..:|     |||....|  :..||::.:
Zfish   110 FQAVQRQAAEKEKESVARARAGSRLSADDGGHDEQLVSFDNNDDWGKTTTQTED--VAITEEDLE 172

  Fly   238 TLREMMDRFNELRRLEKSIEEVHALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAE 302
            .::|   |...:|:||..|.:|:.:|..:..::.:|.|:|..:|.:.:.|.:||::||::|.:|.
Zfish   173 LIKE---RETAIRQLESDILDVNQIFKDLAVMIHDQGEMIDSIEANVESAEVHVERGAEQLQRAA 234

  Fly   303 QHQKKARKKKIMLIVILAAVLLVLLLVGIYL 333
            |:|:|:|||...|.|.|:   :|:|::||.:
Zfish   235 QYQQKSRKKICFLAVGLS---IVVLIIGIVI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx4NP_525057.2 COG5074 <187..313 CDD:227406 37/140 (26%)
SNARE_syntaxin1-like 238..298 CDD:277201 17/59 (29%)
stx12XP_009292403.1 Syntaxin_2 23..125 CDD:464199 20/122 (16%)
SNARE_syntaxin12 174..240 CDD:277229 21/68 (31%)

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